RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF816Q0VGE8 651 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 EBI3Q14213 229 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 MRPL23Q16540 153 aaKnown RBP2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 DEFB121Q5J5C9 76 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 HES3Q5TGS1 186 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 PATE2Q6UY27 113 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 Q6ZQT7 251 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF833PQ6ZTB9 187 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 LRRC75A-AS1Q8N1F1 130 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 FDCSPQ8NFU4 85 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 NPBQ8NG41 125 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNRF2Q8NHG8 242 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 RNF185Q96GF1 192 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZNF714Q96N38 554 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 RNF5Q99942 180 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 NABP2Q9BQ15 211 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 TTTY13Q9BZ97 58 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 MAP1LC3AQ9H492 121 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 RPP21Q9H633 154 aaKnown RBP2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 NDUFA4L2Q9NRX3 87 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CALYQ9NYX4 217 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 KAAG1Q9UBP8 84 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 RPUSD1Q9UJJ7 312 aaKnown RBP2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 AMMECR1Q9Y4X0 333 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 UNC80Q8N2C7 3258 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 MALRD1Q5VYJ5 2156 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 CACNA1GO43497 2377 aa2.06□□□□□ -2.08
HMGB1P41-201ENST00000520234 DNAJC13O75165 2243 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 CADP27708 2225 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGLV2-18A0A075B6J9 118 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGKV1D-37A0A075B6S9 117 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGHV3-43A0A0B4J1X8 118 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRAV3A0A0B4J244 114 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRAV5A0A0B4J249 113 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 FAM240AA0A1B0GVK7 77 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGHV1-46P01743 117 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 APOA2P02652 100 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 SAA2P0DJI9 122 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 C8orf88P0DMB2 117 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGHV3-43DP0DP04 118 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 RNASE2P10153 161 aaKnown RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 MGST1P10620 155 aaKnown RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IFITM1P13164 125 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 COX6B1P14854 86 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IFI27P40305 119 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 SUB1P53999 127 aaKnown RBP eCLIP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 CACNG7P62955 275 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TNFAIP6P98066 277 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 RPL39P5Q59GN2 51 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 ASCL5Q7RTU5 278 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZCCHC24Q8N2G6 241 aaKnown RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 DEFB123Q8N688 67 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TEX29Q8N6K0 151 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 CNEP1R1Q8N9A8 125 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 UBALD1Q8TB05 177 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM167AQ8TBQ9 72 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 IFI27L1Q96BM0 104 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TIMD4Q96H15 378 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRGV9Q99603 122 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 FBXL15Q9H469 300 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 ENY2Q9NPA8 101 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 NHP2Q9NX24 153 aaKnown RBP2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 EPDR1Q9UM22 224 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 FAM215AQ9Y5M1 114 aa2.05□□□□□ -2.08
HMGB1P41-201ENST00000520234 SZT2Q5T011 3432 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 MYMXA0A1B0GTQ4 84 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 A0A1B0GUT8 65 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 K7EM74 188 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 K7EMI3 77 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 TCL1BO95988 128 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 OXTP01178 125 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGLV2-23P01705 113 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 HBDP02042 147 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 CRYGDP07320 174 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 HLA-DMBP28068 263 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 CRIP1P50238 77 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 DLX6P56179 175 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 HIST1H4AP62805 103 aaKnown RBP2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 ERHP84090 104 aaKnown RBP2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 KLK9Q2XQG4 91 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 SPINK9Q5DT21 86 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 Q5XG85 94 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 FAM104BQ5XKR9 115 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 ZFP2Q6ZN57 461 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 PDPNQ86YL7 162 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM61Q8N0U2 210 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 VKORC1L1Q8N0U8 176 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 OR11H6Q8NGC7 330 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 OR4C13Q8NGP0 309 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 OR1L4Q8NGR5 311 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 OR10J6PQ8NGY7 276 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 FAM57AQ8TBR7 257 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 FLYWCH2Q96CP2 140 aaKnown RBP2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 LINC00526Q96FQ7 95 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 CNFNQ9BYD5 112 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 F11RQ9Y624 299 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms