RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TSPOP30536 169 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 GNG4P50150 75 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
SDCBP-207ENST00000520168 AKR1C1Q04828 323 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 CD164Q04900 197 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 ACOT6Q3I5F7 207 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-207ENST00000520168 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 PYY3Q5JQD4 70 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 C1orf194Q5T5A4 169 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 FAM162BQ5T6X4 162 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 FOXI2Q6ZQN5 318 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 OR4X1Q8NH49 305 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 TMEM170AQ8WVE7 144 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 HIST1H2BAQ96A08 127 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 BORCS7Q96B45 105 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 MRPL53Q96EL3 112 aaKnown RBP3.37□□□□□ -1.87
SDCBP-207ENST00000520168 SLC35E1Q96K37 410 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 SPANXDQ9BXN6 97 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 NRN1Q9NPD7 142 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 SMCO4Q9NRQ5 59 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 KCNIP2Q9NS61 270 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 RPRMQ9NS64 109 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 ZNF586Q9NXT0 402 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 MRPS16Q9Y3D3 137 aaKnown RBP3.37□□□□□ -1.87
SDCBP-207ENST00000520168 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 CTXND1A0A1B0GTU2 59 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 A0A1W2PRE2 83 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 B4DEV8 164 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 H3BNG1 76 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 CCL25O15444 150 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 ATP5LO75964 103 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 CRYGDP07320 174 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 AZU1P20160 251 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 OPRK1P41145 380 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 SUB1P53999 127 aaKnown RBP eCLIP3.36□□□□□ -1.87
SDCBP-207ENST00000520168 CCL20P78556 96 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 ERHP84090 104 aaKnown RBP3.36□□□□□ -1.87
SDCBP-207ENST00000520168 IQCJQ1A5X6 159 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 OR10G7Q8NGN6 311 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 OR10J6PQ8NGY7 276 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 NTN5Q8WTR8 489 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-207ENST00000520168 NPVFQ9HCQ7 196 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 NAT8BQ9UHF3 227 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 VAX2Q9UIW0 290 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 WDR83OSQ9Y284 106 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 LRP2P98164 4655 aa3.36□□□□□ -1.87
SDCBP-207ENST00000520168 DNAH8Q96JB1 4490 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 TRAV9-2A0A087WT02 112 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 A0A087WTM6 91 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 A0A087WWC5 75 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 SRP19P09132 144 aaKnown RBP3.35□□□□□ -1.87
SDCBP-207ENST00000520168 DEFB130BP0DP73 79 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 DEFB130AP0DP74 79 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 RPL29P47914 159 aaKnown RBP3.35□□□□□ -1.87
SDCBP-207ENST00000520168 PSMB3P49720 205 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 PSG9Q00887 426 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 PRCDQ00LT1 54 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 FAM74A3Q4VXF1 159 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 C2orf83Q53S99 150 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 FFAR4Q5NUL3 377 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 OR8I2Q8N0Y5 310 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 GATD1Q8NB37 220 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 RXFP4Q8TDU9 374 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 TXNDC17Q9BRA2 123 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 NPCDR1Q9BY65 106 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 SAMD10Q9BYL1 202 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 AAMDCQ9H7C9 122 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 MANBALQ9NQG1 85 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 GNG13Q9P2W3 67 aa3.35□□□□□ -1.87
SDCBP-207ENST00000520168 C7orf77A4D0Y5 90 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE12JA6NER3 117 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 TMEM250H0YL14 139 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 H3BQ15 152 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 VCYO14598 125 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE7O76087 117 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 INSP01308 110 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 SNRPCP09234 159 aaKnown RBP3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 BCL2P10415 239 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 AMTP48728 403 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 PNRC1Q12796 327 aaPredicted RBP3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE2BQ13066 116 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE4Q13068 117 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 JOSD1Q15040 202 aaPredicted RBP3.34□□□□□ -1.87
SDCBP-207ENST00000520168 ZNF726P1Q15940 193 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 ESRGQ1W209 222 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE2EQ4V326 116 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 SPINK9Q5DT21 86 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 C1orf195Q5TG92 126 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 GAGE2AQ6NT46 116 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 EBLN2Q6P2I7 272 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 LCN15Q6UWW0 184 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 PQLC2Q6ZP29 291 aa3.34□□□□□ -1.87
SDCBP-207ENST00000520168 C1orf158Q8N1D5 194 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms