RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 G3V318 75 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 CCL22O00626 93 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 CDKN2CP42773 168 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 TEX36Q5VZQ5 186 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 AAED1Q7RTV5 226 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 C10orf111Q8N326 155 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 FAM216BQ8N7L0 139 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 C5orf56Q8N8D9 126 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 OR4D11Q8NGI4 311 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 OR5A1Q8NGJ0 315 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 DYNLRB2Q8TF09 96 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 ADAT3Q96EY9 351 aaPredicted RBP0.49□□□□□ -2.33
SKP1-205ENST00000519054 SLC50A1Q9BRV3 221 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 COMMD5Q9GZQ3 224 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 IDI2-AS1Q9NZ38 188 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 CYSLTR1Q9Y271 337 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 ERGIC3Q9Y282 383 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 PRELID3BQ9Y3B1 194 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 LOC110117498A0A087WWA1 95 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 TRAV1-1A0A0B4J248 108 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 M0QZK8 103 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 M0R1W7 72 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 PITX3O75364 302 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 RPP14O95059 124 aaKnown RBP0.48□□□□□ -2.33
SKP1-205ENST00000519054 OR5F1O95221 314 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 SSR2P43308 183 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 OMPP47874 163 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 RHEBQ15382 184 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 OR8B8Q15620 311 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 LINC00311Q8N616 119 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 OR4B1Q8NGF8 309 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 SLC25A40Q8TBP6 338 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 DNAJC9Q8WXX5 260 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 SERPINI1Q99574 410 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 OR2J1Q9GZK6 312 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 MIXL1Q9H2W2 232 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 TRABDQ9H4I3 376 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 UQCC1Q9NVA1 299 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 TVP23BQ9NYZ1 205 aa0.48□□□□□ -2.33
SKP1-205ENST00000519054 TRAV14DV4A0A0A6YYC5 116 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 SMIM23A6NLE4 172 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 OR1I1O60431 355 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 CRYZL1O95825 349 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 TCL1BO95988 128 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 MT1BP07438 61 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 CTXN2P0C2S0 81 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 SPART-AS1P0CW21 52 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 CCL3L1P16619 93 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 OGNP20774 298 aaKnown RBP0.47□□□□□ -2.33
SKP1-205ENST00000519054 EDDM3AQ14507 147 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 KHDC3LQ587J8 217 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 OR5AS1Q8N127 324 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 HIST3H2BBQ8N257 126 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 FAM19A2Q8N3H0 131 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 GDPD1Q8N9F7 314 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 SLC30A7Q8NEW0 376 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 OR13D1Q8NGV5 346 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 SKA2Q8WVK7 121 aaPredicted RBP0.47□□□□□ -2.33
SKP1-205ENST00000519054 BORCS7Q96B45 105 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 DPH3Q96FX2 82 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 OR51V1Q9H2C8 321 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 TMEM133Q9H2Q1 129 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 SLC39A9Q9NUM3 307 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 OR5AC2Q9NZP5 309 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 SLC22A13Q9Y226 551 aa0.47□□□□□ -2.33
SKP1-205ENST00000519054 FUOMA2VDF0 154 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 GEMIN2O14893 280 aaKnown RBP0.46□□□□□ -2.34
SKP1-205ENST00000519054 NDUFB3O43676 98 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 IGLV3-1P01715 115 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 RBP1P09455 135 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 PAEPP09466 180 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 SRIP30626 198 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 CEBPGP53567 150 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 HIST1H3AP68431 136 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 H3F3AP84243 136 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 CDK10Q15131 360 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 TMEM97Q5BJF2 176 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 RNASE10Q5GAN6 216 aaKnown RBP0.46□□□□□ -2.34
SKP1-205ENST00000519054 SPANXN5Q5MJ07 72 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 DPPA3Q6W0C5 159 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 LCA10Q71F78 164 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 KRT222Q8N1A0 295 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 OR10J5Q8NHC4 309 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 OBSCN-AS1Q96MR7 158 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 GINS4Q9BRT9 223 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 TLNRD1Q9H1K6 362 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 C19orf12Q9NSK7 152 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 TAS2R4Q9NYW5 299 aa0.46□□□□□ -2.34
SKP1-205ENST00000519054 IGLV3-32A0A0A0MS00 114 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 TRAV12-1A0A0B4J245 112 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 A0A0J9YY99 117 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 PDE6DO43924 150 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 UBL3O95164 117 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 C8GP07360 202 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 OR4E1P0C645 316 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 BAALC-AS2P0C853 105 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 BRS3P32247 399 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 RNASE4P34096 147 aaKnown RBP0.45□□□□□ -2.34
SKP1-205ENST00000519054 RPL22P35268 128 aaKnown RBP0.45□□□□□ -2.34
SKP1-205ENST00000519054 ZNF93P35789 620 aaPredicted RBP0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms