RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 AZU1P20160 251 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 PIK3CD-AS1Q5SR53 167 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 PTH2Q96A98 100 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
TFF3-204ENST00000518498 IGLV2-18A0A075B6J9 118 aa12.82□□□□□ -0.36
TFF3-204ENST00000518498 SPANXN1Q5VSR9 72 aa12.82□□□□□ -0.36
TFF3-204ENST00000518498 CBLN2Q8IUK8 224 aa12.82□□□□□ -0.36
TFF3-204ENST00000518498 GSN-AS1Q9NRJ2 163 aa12.82□□□□□ -0.36
TFF3-204ENST00000518498 M0R2P5 195 aa12.81□□□□□ -0.36
TFF3-204ENST00000518498 DAZ2Q13117 558 aaKnown RBP12.81□□□□□ -0.36
TFF3-204ENST00000518498 ELOBQ15370 118 aa12.81□□□□□ -0.36
TFF3-204ENST00000518498 COX19Q49B96 90 aa12.81□□□□□ -0.36
TFF3-204ENST00000518498 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
TFF3-204ENST00000518498 DKK2Q9UBU2 259 aa12.81□□□□□ -0.36
TFF3-204ENST00000518498 TRBV24-1A0A075B6N3 115 aa12.8□□□□□ -0.36
TFF3-204ENST00000518498 TEX48A0A1B0GUV7 120 aa12.8□□□□□ -0.36
TFF3-204ENST00000518498 SCO1O75880 301 aa12.8□□□□□ -0.36
TFF3-204ENST00000518498 PRM2P04554 102 aa12.8□□□□□ -0.36
TFF3-204ENST00000518498 Q6ZR54 194 aa12.8□□□□□ -0.36
TFF3-204ENST00000518498 NXPH4O95158 308 aa12.79□□□□□ -0.36
TFF3-204ENST00000518498 HBBP68871 147 aa12.79□□□□□ -0.36
TFF3-204ENST00000518498 FAM222AQ5U5X8 452 aa12.79□□□□□ -0.36
TFF3-204ENST00000518498 SMIM15Q7Z3B0 74 aa12.79□□□□□ -0.36
TFF3-204ENST00000518498 OR10AG1Q8NH19 301 aa12.79□□□□□ -0.36
TFF3-204ENST00000518498 M0R381 172 aa12.78□□□□□ -0.36
TFF3-204ENST00000518498 TRGC1P0CF51 173 aa12.78□□□□□ -0.36
TFF3-204ENST00000518498 NTF3P20783 257 aa12.78□□□□□ -0.36
TFF3-204ENST00000518498 TWIST1Q15672 202 aa12.78□□□□□ -0.36
TFF3-204ENST00000518498 FAT2Q9NYQ8 4349 aa12.78□□□□□ -0.36
TFF3-204ENST00000518498 DNAH17Q9UFH2 4485 aa12.77□□□□□ -0.36
TFF3-204ENST00000518498 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 LYRM9A8MSI8 78 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 SPINK4O60575 86 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 HTN3P15516 51 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 ZNF876PQ49A33 203 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
TFF3-204ENST00000518498 RASL10AQ92737 203 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
TFF3-204ENST00000518498 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.37
TFF3-204ENST00000518498 DNAH2Q9P225 4427 aa12.76□□□□□ -0.37
TFF3-204ENST00000518498 TGIF2-C20orf24A0A0A6YYL0 155 aa12.76□□□□□ -0.37
TFF3-204ENST00000518498 A0A1B0GXF2 115 aa12.76□□□□□ -0.37
TFF3-204ENST00000518498 C1orf134Q5TEV5 83 aa12.76□□□□□ -0.37
TFF3-204ENST00000518498 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
TFF3-204ENST00000518498 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
TFF3-204ENST00000518498 MUC21A0A0G2JKD1 596 aa12.75□□□□□ -0.37
TFF3-204ENST00000518498 MUC21A0A140T8X8 626 aa12.75□□□□□ -0.37
TFF3-204ENST00000518498 A8MWV9 139 aa12.75□□□□□ -0.37
TFF3-204ENST00000518498 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
TFF3-204ENST00000518498 SMIM17P0DL12 118 aa12.74□□□□□ -0.37
TFF3-204ENST00000518498 CAMPP49913 170 aa12.74□□□□□ -0.37
TFF3-204ENST00000518498 SSTP61278 116 aa12.74□□□□□ -0.37
TFF3-204ENST00000518498 CIDEAO60543 219 aa12.73□□□□□ -0.37
TFF3-204ENST00000518498 MT-ND6P03923 174 aa12.73□□□□□ -0.37
TFF3-204ENST00000518498 DAD1P61803 113 aa12.73□□□□□ -0.37
TFF3-204ENST00000518498 GATD1Q8NB37 220 aa12.73□□□□□ -0.37
TFF3-204ENST00000518498 GNB1LQ9BYB4 327 aa12.73□□□□□ -0.37
TFF3-204ENST00000518498 TMEM191AQ9H0A3 160 aa12.73□□□□□ -0.37
TFF3-204ENST00000518498 MRPL16Q9NX20 251 aaKnown RBP12.73□□□□□ -0.37
TFF3-204ENST00000518498 PKD1P98161 4303 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 COLCA2A8K830 154 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 HLA-DQA1P01909 254 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 RAB4BP61018 213 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 DPH3P1Q9H4G8 78 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 MSRB1Q9NZV6 116 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 NACAE9PAV3 2078 aa12.72□□□□□ -0.37
TFF3-204ENST00000518498 RHODO00212 210 aa12.71□□□□□ -0.37
TFF3-204ENST00000518498 Q6ZTI0 123 aa12.71□□□□□ -0.37
TFF3-204ENST00000518498 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.37
TFF3-204ENST00000518498 C18orf15Q96N68 181 aa12.71□□□□□ -0.37
TFF3-204ENST00000518498 KRTAP4-5Q9BYR2 181 aa12.71□□□□□ -0.37
TFF3-204ENST00000518498 PKHD1P08F94 4074 aa12.71□□□□□ -0.37
TFF3-204ENST00000518498 TRGV2A0A075B6R0 118 aa12.7□□□□□ -0.38
TFF3-204ENST00000518498 C15orf53Q8NAA6 179 aa12.7□□□□□ -0.38
TFF3-204ENST00000518498 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 GAGE12BA1L429 117 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 RS1O15537 224 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 GAGE7O76087 117 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 RAB5AP20339 215 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 TMEM136Q6ZRR5 245 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 OR4C5Q8NGB2 326 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 FRZBQ92765 325 aa12.69□□□□□ -0.38
TFF3-204ENST00000518498 RYR1P21817 5038 aa12.68□□□□□ -0.38
TFF3-204ENST00000518498 EVI2AP22794 236 aa12.68□□□□□ -0.38
TFF3-204ENST00000518498 ZFP2Q6ZN57 461 aa12.68□□□□□ -0.38
TFF3-204ENST00000518498 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
TFF3-204ENST00000518498 DEFB130BP0DP73 79 aa12.67□□□□□ -0.38
TFF3-204ENST00000518498 DEFB130AP0DP74 79 aa12.67□□□□□ -0.38
TFF3-204ENST00000518498 RPS10P46783 165 aaKnown RBP12.67□□□□□ -0.38
TFF3-204ENST00000518498 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
TFF3-204ENST00000518498 FAM104BQ5XKR9 115 aa12.67□□□□□ -0.38
TFF3-204ENST00000518498 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
TFF3-204ENST00000518498 DYNC1H1Q14204 4646 aaKnown RBP12.66□□□□□ -0.38
TFF3-204ENST00000518498 CRYGDP07320 174 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms