RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HIST1H2BJP06899 126 aa-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 FAM236CP0DP71 79 aa-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 MRPS36P82909 103 aaKnown RBP-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 MSMO1Q15800 293 aa-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 FKBP1CQ5VVH2 108 aa-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 CD302Q8IX05 232 aa-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 SMIM19Q96E16 107 aa-4.66□□□□□ -3.16
RNU6-539P-201ENST00000516665 FAM92AA1XBS5 289 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 CALUO43852 315 aaPredicted RBP-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 ADCYAP1P18509 176 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 CLVS2Q5SYC1 327 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 SLC35B4Q969S0 331 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 SMIM7Q9BQ49 75 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 VPS25Q9BRG1 176 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 FKBP11Q9NYL4 201 aa-4.67□□□□□ -3.16
RNU6-539P-201ENST00000516665 MYOM3Q5VTT5 1437 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 TRBV7-4A0A0J9YYF1 115 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 LINC00959A0A1B0GUT2 108 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 UBE2G2P60604 165 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 SLAMF1Q13291 335 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 TRAPPC5Q8IUR0 188 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 PRELID3AQ96N28 172 aa-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 GPX7Q96SL4 187 aaPredicted RBP-4.68□□□□□ -3.16
RNU6-539P-201ENST00000516665 PTPRMP28827 1452 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 CLPSL1A2RUU4 121 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 MT-ND6P03923 174 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 SERPINA6P08185 405 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 INSL3P51460 131 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 PSME3P61289 254 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 LRRC20Q8TCA0 184 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 PPDPFLQ8WWR9 84 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 DRC3Q9H069 523 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 CRIPTQ9P021 101 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 RTL9Q8NET4 1388 aa-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 NUP210Q8TEM1 1887 aaPredicted RBP-4.69□□□□□ -3.16
RNU6-539P-201ENST00000516665 A0A087WUJ7 227 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 RAB19A4D1S5 217 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 C8GP07360 202 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 ANXA8P13928 327 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 NFYBP25208 207 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 ANXA8L1Q5VT79 327 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 WFDC13Q8IUB5 93 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 BRK1Q8WUW1 75 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 CMSS1Q9BQ75 279 aaKnown RBP-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 C1orf109Q9NX04 203 aa-4.7□□□□□ -3.16
RNU6-539P-201ENST00000516665 MYH1P12882 1939 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 TRAV4A0A0B4J268 109 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 C5orf58C9J3I9 102 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 SMIM6P0DI80 62 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 SLC25A6P12236 298 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 MYL12AP19105 171 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 SYT1P21579 422 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 MYL6P60660 151 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 STK38Q15208 465 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 C9orf116Q5BN46 136 aaPredicted RBP-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 OR6V1Q8N148 313 aa-4.71□□□□□ -3.16
RNU6-539P-201ENST00000516665 NDUFA11Q86Y39 141 aa-4.72□□□□□ -3.17
RNU6-539P-201ENST00000516665 SMIM4Q8WVI0 70 aa-4.72□□□□□ -3.17
RNU6-539P-201ENST00000516665 GLTPQ9NZD2 209 aa-4.72□□□□□ -3.17
RNU6-539P-201ENST00000516665 GOLGA8KD6RF30 607 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 STAG3L2P0CL84 134 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 C8orf88P0DMB2 117 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 SPCS2Q15005 226 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 LAMTOR3Q9UHA4 124 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 WDR97A6NE52 1622 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 PIK3C2AO00443 1686 aa-4.73□□□□□ -3.17
RNU6-539P-201ENST00000516665 TRAV12-3A0A0B4J271 114 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 HPGDSO60760 199 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 PIPP12273 146 aaPredicted RBP-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 KDELR2P33947 212 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 HBBP68871 147 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 CLPSL2Q6UWE3 100 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 VSTM2AQ8TAG5 236 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 NDUFAF1Q9Y375 327 aa-4.74□□□□□ -3.17
RNU6-539P-201ENST00000516665 NCAPD3P42695 1498 aa-4.75□□□□□ -3.17
RNU6-539P-201ENST00000516665 ARHGEF12Q9NZN5 1544 aa-4.75□□□□□ -3.17
RNU6-539P-201ENST00000516665 ERP29P30040 261 aaKnown RBP-4.75□□□□□ -3.17
RNU6-539P-201ENST00000516665 RNASE7Q9H1E1 156 aaKnown RBP-4.75□□□□□ -3.17
RNU6-539P-201ENST00000516665 UQCC1Q9NVA1 299 aa-4.75□□□□□ -3.17
RNU6-539P-201ENST00000516665 TRBV19A0A075B6N1 114 aa-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 MLLT11Q13015 90 aaPredicted RBP-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 CDC42SE2Q9NRR3 84 aa-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 NDUFA12Q9UI09 145 aa-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 TRAPPC8Q9Y2L5 1435 aa-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 SETBP1Q9Y6X0 1596 aa-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 NKTRP30414 1462 aaKnown RBP-4.76□□□□□ -3.17
RNU6-539P-201ENST00000516665 ARPC5O15511 151 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 TTRP02766 147 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 TPT1P13693 172 aaKnown RBP-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 FGF7P21781 194 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 RPS28P62857 69 aaKnown RBP-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 TMCO2Q7Z6W1 182 aaPredicted RBP-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 IFT20Q8IY31 132 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 Q8N8P6 123 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 ERG28Q9UKR5 140 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 EVC2Q86UK5 1308 aa-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 MARF1Q9Y4F3 1742 aaKnown RBP-4.77□□□□□ -3.17
RNU6-539P-201ENST00000516665 M0R135 149 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 IFNA6P05013 189 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 SLC25A4P12235 298 aa-4.78□□□□□ -3.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms