RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 TCOF1Q13428 1488 aaKnown RBP-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 GAPVD1Q14C86 1478 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 ADGRL3Q9HAR2 1447 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRBV19A0A075B6N1 114 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 IGHV1-24A0A0C4DH33 117 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 ERICH2A1L162 156 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM25EA8MYX2 175 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRGC2P03986 189 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 C8orf88P0DMB2 117 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 FABP2P12104 132 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 CCL3L1P16619 93 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 LCN1P31025 176 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 CKS2P33552 79 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 S100A5P33763 92 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 HBBP68871 147 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 MED21Q13503 144 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 HIST3H3Q16695 136 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 CCDC122Q5T0U0 273 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 ALKAL1Q6UXT8 129 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 BAGE3Q86Y29 109 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 OTUD6BQ8N6M0 293 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR8J2Q8NGG1 315 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR5H6Q8NGV6 325 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 VSTM2AQ8TAG5 236 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 PPDPFLQ8WWR9 84 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 SIKE1Q9BRV8 207 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 PARVBQ9HBI1 364 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 LRTM1Q9HBL6 345 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 APLNQ9ULZ1 77 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 MPC1Q9Y5U8 109 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 CUBNO60494 3623 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 RELNP78509 3460 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 GOLGA4Q13439 2230 aaKnown RBP-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 TACC2O95359 2948 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 BIRC6Q9NR09 4857 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 ARAP2Q8WZ64 1704 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 WDR97A6NE52 1622 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 PTPN23Q9H3S7 1636 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 ADGRB1O14514 1584 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 POLA1P09884 1462 aaPredicted RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 C9orf84Q5VXU9 1444 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 NSD3Q9BZ95 1437 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 PRKDCP78527 4128 aaKnown RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 RTL9Q8NET4 1388 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 CCDC171Q6TFL3 1326 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 TMEM213A2RRL7 107 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 G3V2T6 193 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 J3KT08 172 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 K7EP34 96 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 KPNA4O00629 521 aaPredicted RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 CHP2O43745 196 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 SSSCA1O60232 199 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 NDUFC2O95298 119 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 S100A6P06703 90 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 COX5BP10606 129 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 OGNP20774 298 aaKnown RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 PPP1R2P41236 205 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 MAXP61244 160 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 SPA17Q15506 151 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR8B8Q15620 311 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 H1FX-AS1Q4G0G2 97 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 SCGB2B2Q4G0G5 96 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM9CQ8IZT9 166 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 C9orf62Q8N4C0 152 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 TEX29Q8N6K0 151 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 CLDN22Q8N7P3 220 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 SMIM4Q8WVI0 70 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 DIRC1Q969H9 104 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 BTF3L4Q96K17 158 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 PRELID3AQ96N28 172 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 AGPAT3Q9NRZ7 376 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 PLEKHJ1Q9NW61 149 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 FKBP11Q9NYL4 201 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 TAS2R8Q9NYW2 309 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 USE1Q9NZ43 259 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 ERG28Q9UKR5 140 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 PYCARDQ9ULZ3 195 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 UFC1Q9Y3C8 167 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 CCDC168Q8NDH2 2452 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 XRN1Q8IZH2 1706 aaKnown RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 SCN7AQ01118 1682 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 CAMSAP1Q5T5Y3 1602 aa-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.53□□□□□ -2.49
RNU4-49P-201ENST00000516080 MRC1P22897 1456 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 PTPRGP23470 1445 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 MYOM3Q5VTT5 1437 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 PPLO60437 1756 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 SCN11AQ9UI33 1791 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 QSER1Q2KHR3 1735 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 PNMA8CA0A1B0GUJ8 204 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 A0A1B0GW64 132 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 FABP12A6NFH5 140 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 CLDN24A6NM45 220 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 RIIAD1A6NNX1 92 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 IQCF5A8MTL0 148 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 H3BQV1 296 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 I3L2K1 104 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 AIPO00170 330 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms