RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 ZNF609O15014 1411 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 IGKV3-7A0A075B6H7 116 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 TRAV23DV6A0A075B6W5 121 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 INE1O15225 51 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 MRPS14O60783 128 aaKnown RBP1.25□□□□□ -2.21
MATR3-223ENST00000514402 IL9P15248 144 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 CBLN1P23435 193 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 C9orf116Q5BN46 136 aaPredicted RBP1.25□□□□□ -2.21
MATR3-223ENST00000514402 TTC9CQ8N5M4 171 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 SPTSSBQ8NFR3 76 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 C10orf82Q8WW14 230 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 IFI27L1Q96BM0 104 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 DMAC1Q96GE9 116 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 MRPL35Q9NZE8 188 aaKnown RBP1.25□□□□□ -2.21
MATR3-223ENST00000514402 TMEM14CQ9P0S9 112 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 MUC22E2RYF6 1773 aaPredicted RBP1.25□□□□□ -2.21
MATR3-223ENST00000514402 UNC13CQ8NB66 2214 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 CC2D2AQ9P2K1 1620 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 MCM3APO60318 1980 aa1.25□□□□□ -2.21
MATR3-223ENST00000514402 FAM24AA6NFZ4 105 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 A6NIN4 97 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 MPC2O95563 127 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 PDE6GP18545 87 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 LINC00322Q6ZN03 302 aaPredicted RBP1.24□□□□□ -2.21
MATR3-223ENST00000514402 C22orf24Q9Y442 160 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 SNURFQ9Y675 71 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 SCRIBQ14160 1630 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 PCDH15Q96QU1 1955 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 ADGRB2O60241 1585 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 ALPK2Q86TB3 2170 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 AKAP12Q02952 1782 aa1.24□□□□□ -2.21
MATR3-223ENST00000514402 CPSF1Q10570 1443 aaKnown RBP1.23□□□□□ -2.21
MATR3-223ENST00000514402 SPHKAPQ2M3C7 1700 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 PTPRDP23468 1912 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 TTC37Q6PGP7 1564 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 LOC110117498A0A087WWA1 95 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 TRAV12-3A0A0B4J271 114 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 M0R2N4 97 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 IGHV3-30P01768 117 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 IGHV3-30-5P0DP03 117 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 GNG2P59768 71 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 RPL37AP61513 92 aaKnown RBP1.23□□□□□ -2.21
MATR3-223ENST00000514402 C5orf38Q86SI9 138 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 ZNF563Q8TA94 476 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 AQP10Q96PS8 301 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 SNHG12Q9BXW3 62 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 MED9Q9NWA0 146 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 LAMB1P07942 1786 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 IFT140Q96RY7 1462 aa1.23□□□□□ -2.21
MATR3-223ENST00000514402 TNRC6AQ8NDV7 1962 aaKnown RBP1.23□□□□□ -2.21
MATR3-223ENST00000514402 PHRF1Q9P1Y6 1649 aaKnown RBP1.22□□□□□ -2.21
MATR3-223ENST00000514402 TNRC6BQ9UPQ9 1833 aaKnown RBP1.22□□□□□ -2.21
MATR3-223ENST00000514402 IGLV3-32A0A0A0MS00 114 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 TRBV6-7A0A0A0MS04 114 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 PIGBOS1A0A0B4J2F0 54 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 TRBV10-3A0A0K0K1G6 114 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 CCKP06307 115 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 RAPGEF2Q9Y4G8 1499 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 MYOFQ9NZM1 2061 aa1.22□□□□□ -2.21
MATR3-223ENST00000514402 ARFGEF3Q5TH69 2177 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 TRAV13-2A0A0B4J235 113 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 UBE2L5PA0A1B0GUS4 154 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 LOC101927531A0A1B0GV80 90 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 RBAKDNA6NC62 111 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 TMEM262E9PQX1 116 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 UBE2L3P68036 154 aaKnown RBP1.21□□□□□ -2.22
MATR3-223ENST00000514402 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 COL5A1-AS1Q5SY13 56 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 GDF5OSQ5U4N7 250 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 NDUFA11Q86Y39 141 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 SBSPONQ8IVN8 264 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 DPH3P1Q9H4G8 78 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 C10orf71Q711Q0 1435 aa1.21□□□□□ -2.22
MATR3-223ENST00000514402 ARAP2Q8WZ64 1704 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 ARHGAP5Q13017 1502 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 ZNF142P52746 1687 aaPredicted RBP1.2□□□□□ -2.22
MATR3-223ENST00000514402 CITO14578 2027 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 SHROOM2Q13796 1616 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 HIGD1CA8MV81 97 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 HCG22E2RYF7 251 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 SNCAP37840 140 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
MATR3-223ENST00000514402 UNQ6190/PRO20217Q6UXQ8 127 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 CYP2G1PQ6ZSU1 146 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 COMMD6Q7Z4G1 85 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 CASKIN1Q8WXD9 1431 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 RB1CC1Q8TDY2 1594 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 ANKRD26Q9UPS8 1709 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 RREB1Q92766 1687 aa1.2□□□□□ -2.22
MATR3-223ENST00000514402 NINQ8N4C6 2090 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 IGKV3D-7A0A0C4DH55 119 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 IGKV3OR2-268A0A0C4DH90 116 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 NBDYA0A0U1RRE5 68 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 IGKV2-29A2NJV5 120 aaPredicted RBP1.19□□□□□ -2.22
MATR3-223ENST00000514402 SSSCA1O60232 199 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 UBE2D1P51668 147 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 CCL8P80075 99 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 AMELYQ99218 206 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms