RNA–Protein interactions for RNA: ENST00000512883.1

ARHGEF28-211, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2 BASIC

Gene ARHGEF28, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-211ENST00000512883 CCDC140Q96MF4 163 aa12.18□□□□□ -0.46
ARHGEF28-211ENST00000512883 IGIPA6NJ69 53 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 ATP6V0E1O15342 81 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 MEIG1Q5JSS6 88 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 SPTA1P02549 2419 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 PRSS2P07478 247 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 ATXN8Q156A1 80 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 FAM74A4Q5TZK3 123 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 VMO1Q7Z5L0 202 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 LINC00527Q9UJ94 153 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 MUC4Q99102 2169 aa12.17□□□□□ -0.46
ARHGEF28-211ENST00000512883 B9A039 149 aa12.16□□□□□ -0.46
ARHGEF28-211ENST00000512883 NPC2P61916 151 aa12.16□□□□□ -0.46
ARHGEF28-211ENST00000512883 ZFAND2AQ8N6M9 145 aa12.16□□□□□ -0.46
ARHGEF28-211ENST00000512883 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
ARHGEF28-211ENST00000512883 AMELXQ99217 191 aa12.16□□□□□ -0.46
ARHGEF28-211ENST00000512883 H3BMM0 161 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 UBE2WQ96B02 151 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 FAM110AQ9BQ89 295 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 ZNF56Q15929 161 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 C2orf82Q6UX34 121 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 OR10J6PQ8NGY7 276 aa12.15□□□□□ -0.46
ARHGEF28-211ENST00000512883 CD3EP07766 207 aa12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 DUX3Q96PT4 197 aa12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 Q8N9W7 124 aa12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 TRIAP1O43715 76 aa12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 FOXC1Q12948 553 aa12.14□□□□□ -0.47
ARHGEF28-211ENST00000512883 Q6ZSV7 163 aa12.13□□□□□ -0.47
ARHGEF28-211ENST00000512883 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
ARHGEF28-211ENST00000512883 AKAP13Q12802 2813 aa12.13□□□□□ -0.47
ARHGEF28-211ENST00000512883 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
ARHGEF28-211ENST00000512883 FAM110DQ8TAY7 271 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF28-211ENST00000512883 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
ARHGEF28-211ENST00000512883 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
ARHGEF28-211ENST00000512883 ZNF876PQ49A33 203 aa12.12□□□□□ -0.47
ARHGEF28-211ENST00000512883 ZFHX3Q15911 3703 aa12.12□□□□□ -0.47
ARHGEF28-211ENST00000512883 TRBV10-2A0A0K0K1G8 114 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 MRPL53Q96EL3 112 aaKnown RBP12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 COL6A6A6NMZ7 2263 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 VCYO14598 125 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 PPP1R17O96001 155 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 CLEC2BQ92478 149 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 EEF1AKMT3Q96AZ1 226 aa12.11□□□□□ -0.47
ARHGEF28-211ENST00000512883 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 ZNF292O60281 2723 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 P0DMU3 169 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 POLR2KP53803 58 aaKnown RBP12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 Q8N6K4 173 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 LINC00477Q96M19 166 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 SPXQ9BT56 116 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 LGALS9O00182 355 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 IGFL3Q6UXB1 125 aa12.1□□□□□ -0.47
ARHGEF28-211ENST00000512883 A0A0B4J2C4 111 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 C9orf139Q6ZV77 190 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 LEPROTO15243 131 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 UBE2E1P51965 193 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 LINC00315P59091 139 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
ARHGEF28-211ENST00000512883 UNQ9165/PRO28630Q6UXU0 137 aa12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 BRI3O95415 125 aa12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 Q6Q795 121 aa12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 PRRC2AP48634 2157 aaKnown RBP12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 TLN1Q9Y490 2541 aaKnown RBP12.08□□□□□ -0.48
ARHGEF28-211ENST00000512883 H7C423 109 aa12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 ITLN2Q8WWU7 325 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 SORL1Q92673 2214 aa12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
ARHGEF28-211ENST00000512883 A0A0J9YXY3 114 aa12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 LENEPQ9Y5L5 61 aa12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 SPTAN1Q13813 2472 aaKnown RBP12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 TRAV8-3A0A0A6YYJ7 113 aa12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 M0QXV9 152 aa12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 M0R2P5 195 aa12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 RNASE13Q5GAN3 156 aaKnown RBP12.06□□□□□ -0.48
ARHGEF28-211ENST00000512883 M0R1W7 72 aa12.05□□□□□ -0.48
ARHGEF28-211ENST00000512883 TMEM219Q86XT9 240 aa12.05□□□□□ -0.48
ARHGEF28-211ENST00000512883 ICOSQ9Y6W8 199 aa12.05□□□□□ -0.48
ARHGEF28-211ENST00000512883 CEP295Q9C0D2 2601 aa12.05□□□□□ -0.48
ARHGEF28-211ENST00000512883 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
ARHGEF28-211ENST00000512883 A8MZ25 164 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms