RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.77□□□□□ -1.81
CHD1-208ENST00000512392 TMSB15BA0A087X1C1 80 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 TRBV10-3A0A0K0K1G6 114 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 ZNF79Q15937 498 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 C18orf32Q8TCD1 76 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 DOCK2Q92608 1830 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 ATP10BO94823 1461 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 KNDC1Q76NI1 1749 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 CXCL8P10145 99 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 MOBPQ13875 183 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
CHD1-208ENST00000512392 COL2A1P02458 1487 aaPredicted RBP3.76□□□□□ -1.81
CHD1-208ENST00000512392 BLMP54132 1417 aaPredicted RBP3.75□□□□□ -1.81
CHD1-208ENST00000512392 PLXNA2O75051 1894 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 CFAP74Q9C0B2 1584 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 IGKV3-20P01619 116 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 CISD3P0C7P0 127 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 MT3P25713 68 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 FAM223AQ8IWN6 122 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 LHFPL6Q9Y693 200 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 MYH4Q9Y623 1939 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 WIZO95785 1651 aa3.75□□□□□ -1.81
CHD1-208ENST00000512392 TNS1Q9HBL0 1735 aaKnown RBP3.75□□□□□ -1.81
CHD1-208ENST00000512392 TEX49A0A1B0GTD5 131 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 CXorf51AA0A1B0GTR3 108 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 SETBP1Q9Y6X0 1596 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 PCNX2A6NKB5 2137 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 MAP3K4Q9Y6R4 1608 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 C7orf77A4D0Y5 90 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 KRTAP10-9P60411 292 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 CFAP126Q5VTH2 177 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 MAPK1IP1LQ8NDC0 245 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 DOCK9Q9BZ29 2069 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 NWD2Q9ULI1 1742 aa3.74□□□□□ -1.81
CHD1-208ENST00000512392 TCF20Q9UGU0 1960 aaKnown RBP3.73□□□□□ -1.81
CHD1-208ENST00000512392 NDUFC1O43677 76 aa3.73□□□□□ -1.81
CHD1-208ENST00000512392 IGFBP7Q16270 282 aa3.73□□□□□ -1.81
CHD1-208ENST00000512392 CYP4F30PQ9H0H9 118 aa3.73□□□□□ -1.81
CHD1-208ENST00000512392 R4GN34 69 aa3.73□□□□□ -1.81
CHD1-208ENST00000512392 ADAMTS7Q9UKP4 1686 aa3.73□□□□□ -1.81
CHD1-208ENST00000512392 PEAK1Q9H792 1746 aa3.73□□□□□ -1.81
CHD1-208ENST00000512392 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 ZNF833PQ6ZTB9 187 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 IFI27L1Q96BM0 104 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 GFRA4Q9GZZ7 299 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 PTPRDP23468 1912 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 NRXN1Q9ULB1 1477 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 SCN4AP35499 1836 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 TCHHQ07283 1943 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 TRAV12-1A0A0B4J245 112 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 A0A1W2PNM2 257 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 C2orf70A6NJV1 201 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 CSAG1Q6PB30 78 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.72□□□□□ -1.81
CHD1-208ENST00000512392 MYO16Q9Y6X6 1858 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 SDK2Q58EX2 2172 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 MED13Q9UHV7 2174 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 MROH2BQ7Z745 1585 aa3.72□□□□□ -1.81
CHD1-208ENST00000512392 CUX1P39880 1505 aa3.71□□□□□ -1.81
CHD1-208ENST00000512392 TARBP1Q13395 1621 aaKnown RBP3.71□□□□□ -1.82
CHD1-208ENST00000512392 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 ERHP84090 104 aaKnown RBP3.71□□□□□ -1.82
CHD1-208ENST00000512392 LINC00167Q96N53 147 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 PATJQ8NI35 1801 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 DUOX2Q9NRD8 1548 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 MYO3AQ8NEV4 1616 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 KANTRA0A1W2PQU2 76 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 F2Z2F3 143 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 UBE2D3P61077 147 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 UBE2D2P62837 147 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 Q5VV11 94 aa3.71□□□□□ -1.82
CHD1-208ENST00000512392 KIAA2026Q5HYC2 2103 aa3.7□□□□□ -1.82
CHD1-208ENST00000512392 PREX2Q70Z35 1606 aa3.7□□□□□ -1.82
CHD1-208ENST00000512392 COL27A1Q8IZC6 1860 aaPredicted RBP3.7□□□□□ -1.82
CHD1-208ENST00000512392 COL4A6Q14031 1691 aa3.7□□□□□ -1.82
CHD1-208ENST00000512392 TRAV12-3A0A0B4J271 114 aa3.7□□□□□ -1.82
CHD1-208ENST00000512392 Q8N6K4 173 aa3.7□□□□□ -1.82
CHD1-208ENST00000512392 UNC13BO14795 1591 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 UBR1Q8IWV7 1749 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 ABCC2Q92887 1545 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 PRXQ9BXM0 1461 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 LAMB1P07942 1786 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 EFCAB5A4FU69 1503 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 SNRPFP62306 86 aaKnown RBP3.69□□□□□ -1.82
CHD1-208ENST00000512392 VMO1Q7Z5L0 202 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 LINC01600Q96MT4 127 aa3.69□□□□□ -1.82
CHD1-208ENST00000512392 LTBP2Q14767 1821 aa3.68□□□□□ -1.82
CHD1-208ENST00000512392 KIAA1549LQ6ZVL6 1849 aa3.68□□□□□ -1.82
CHD1-208ENST00000512392 KLKP1Q107X0 134 aa3.68□□□□□ -1.82
CHD1-208ENST00000512392 PRO1854Q9UHT4 67 aa3.68□□□□□ -1.82
CHD1-208ENST00000512392 SCN11AQ9UI33 1791 aa3.68□□□□□ -1.82
CHD1-208ENST00000512392 C10orf128Q5T292 105 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 IGKV3D-15A0A087WSY6 115 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 A0A087WWC5 75 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 SDHAF1A6NFY7 115 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms