RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OPRPNQ99935 248 aaPredicted RBP11.37□□□□□ -0.59
USP38-202ENST00000510377 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
USP38-202ENST00000510377 WDFY3Q8IZQ1 3526 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 GAGE2BQ13066 116 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 BLCAPP62952 87 aa11.36□□□□□ -0.59
USP38-202ENST00000510377 SYNJ2BPP57105 145 aa11.36□□□□□ -0.59
USP38-202ENST00000510377 C16orf54Q6UWD8 224 aa11.36□□□□□ -0.59
USP38-202ENST00000510377 RASL10AQ92737 203 aa11.36□□□□□ -0.59
USP38-202ENST00000510377 ZNF48Q96MX3 618 aaPredicted RBP11.36□□□□□ -0.59
USP38-202ENST00000510377 CENPEQ02224 2701 aa11.36□□□□□ -0.59
USP38-202ENST00000510377 ITLN2Q8WWU7 325 aaPredicted RBP11.36□□□□□ -0.59
USP38-202ENST00000510377 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
USP38-202ENST00000510377 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
USP38-202ENST00000510377 PRR9Q5T870 116 aa11.35□□□□□ -0.59
USP38-202ENST00000510377 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
USP38-202ENST00000510377 F8W735 103 aaPredicted RBP11.35□□□□□ -0.59
USP38-202ENST00000510377 NDUFA4O00483 81 aa11.35□□□□□ -0.59
USP38-202ENST00000510377 LINC01587Q99440 93 aa11.35□□□□□ -0.59
USP38-202ENST00000510377 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 IGHV1-69DA0A0B4J2H0 117 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 TMEM262E9PQX1 116 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 IGHV1-69P01742 117 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 TOMM6Q96B49 74 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
USP38-202ENST00000510377 NRACQ8N912 160 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 TIMM21Q9BVV7 248 aa11.34□□□□□ -0.59
USP38-202ENST00000510377 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.59
USP38-202ENST00000510377 SLC25A20O43772 301 aa11.33□□□□□ -0.59
USP38-202ENST00000510377 C2orf82Q6UX34 121 aa11.33□□□□□ -0.59
USP38-202ENST00000510377 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.59
USP38-202ENST00000510377 A4D1N5 150 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 FOXI1Q12951 378 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 HECTD1Q9ULT8 2610 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 A0A0J9YXV3 536 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
USP38-202ENST00000510377 NRGNQ92686 78 aa11.33□□□□□ -0.6
USP38-202ENST00000510377 DOPEY1Q5JWR5 2465 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 ACANP16112 2415 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 TRAV12-1A0A0B4J245 112 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 M0R2P5 195 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 CDSNQ15517 529 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 MRPL53Q96EL3 112 aaKnown RBP11.32□□□□□ -0.6
USP38-202ENST00000510377 ZNF292O60281 2723 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
USP38-202ENST00000510377 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 TRBV20-1A0A075B6N2 111 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 IGHV7-4-1A0A0J9YVY3 117 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 TOMM7Q9P0U1 55 aa11.32□□□□□ -0.6
USP38-202ENST00000510377 SIRPDQ9H106 197 aa11.31□□□□□ -0.6
USP38-202ENST00000510377 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
USP38-202ENST00000510377 TRAV8-3A0A0A6YYJ7 113 aa11.31□□□□□ -0.6
USP38-202ENST00000510377 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
USP38-202ENST00000510377 TSPAN13O95857 204 aa11.31□□□□□ -0.6
USP38-202ENST00000510377 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
USP38-202ENST00000510377 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
USP38-202ENST00000510377 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
USP38-202ENST00000510377 PRORYQ9H606 182 aa11.3□□□□□ -0.6
USP38-202ENST00000510377 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
USP38-202ENST00000510377 ATXN8Q156A1 80 aa11.3□□□□□ -0.6
USP38-202ENST00000510377 TRPT1Q86TN4 253 aaKnown RBP11.3□□□□□ -0.6
USP38-202ENST00000510377 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
USP38-202ENST00000510377 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
USP38-202ENST00000510377 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
USP38-202ENST00000510377 IGHG4P01861 327 aa11.29□□□□□ -0.6
USP38-202ENST00000510377 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
USP38-202ENST00000510377 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
USP38-202ENST00000510377 DEFB131AP59861 70 aa11.29□□□□□ -0.6
USP38-202ENST00000510377 IGHV1OR15-1A0A075B7D0 117 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 MT-ATP8P03928 68 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 CFC1BP0CG36 223 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 CFC1P0CG37 223 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 TCL1BO95988 128 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 TEN1Q86WV5 123 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
USP38-202ENST00000510377 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.6
USP38-202ENST00000510377 LOC400499M0QZD8 3231 aa11.27□□□□□ -0.61
USP38-202ENST00000510377 FN1P02751 2386 aaKnown RBP11.27□□□□□ -0.61
USP38-202ENST00000510377 A0A1W2PRX2 142 aa11.27□□□□□ -0.61
USP38-202ENST00000510377 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
USP38-202ENST00000510377 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.61
USP38-202ENST00000510377 I3L3M4 83 aa11.27□□□□□ -0.61
USP38-202ENST00000510377 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
USP38-202ENST00000510377 NDUFA11Q86Y39 141 aa11.26□□□□□ -0.61
USP38-202ENST00000510377 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
USP38-202ENST00000510377 MAP1AP78559 2803 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms