RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 IGHV3-38A0A0C4DH36 116 aa13.54□□□□□ -0.24
SFXN1-209ENST00000508290 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
SFXN1-209ENST00000508290 XKRY2A2RUG3 117 aa13.54□□□□□ -0.24
SFXN1-209ENST00000508290 LINC01556Q5JQF7 62 aa13.53□□□□□ -0.24
SFXN1-209ENST00000508290 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
SFXN1-209ENST00000508290 ALKAL2Q6UX46 152 aa13.53□□□□□ -0.24
SFXN1-209ENST00000508290 SAMD10Q9BYL1 202 aa13.53□□□□□ -0.24
SFXN1-209ENST00000508290 JPT2Q9H910 190 aa13.53□□□□□ -0.24
SFXN1-209ENST00000508290 CRYGDP07320 174 aa13.52□□□□□ -0.25
SFXN1-209ENST00000508290 LINC00694P0DN24 101 aa13.52□□□□□ -0.25
SFXN1-209ENST00000508290 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
SFXN1-209ENST00000508290 OR10J3Q5JRS4 329 aa13.52□□□□□ -0.25
SFXN1-209ENST00000508290 SPANXN1Q5VSR9 72 aa13.52□□□□□ -0.25
SFXN1-209ENST00000508290 Q6ZSN1 163 aa13.52□□□□□ -0.25
SFXN1-209ENST00000508290 OR10AG1Q8NH19 301 aa13.51□□□□□ -0.25
SFXN1-209ENST00000508290 LYPD6BQ8NI32 183 aa13.51□□□□□ -0.25
SFXN1-209ENST00000508290 MSRB1Q9NZV6 116 aa13.51□□□□□ -0.25
SFXN1-209ENST00000508290 A0A087WWL8 130 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 GAGE12JA6NER3 117 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 TMEM250H0YL14 139 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
SFXN1-209ENST00000508290 IGLV2-8P01709 118 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 P01737 135 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 GAGE1Q13065 139 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 GAGE4Q13068 117 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 GAGE5Q13069 117 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 GAGE13Q4V321 117 aa13.5□□□□□ -0.25
SFXN1-209ENST00000508290 Q6ZRN7 208 aaPredicted RBP13.5□□□□□ -0.25
SFXN1-209ENST00000508290 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
SFXN1-209ENST00000508290 RAB4BP61018 213 aa13.49□□□□□ -0.25
SFXN1-209ENST00000508290 OR2D3Q8NGH3 330 aa13.49□□□□□ -0.25
SFXN1-209ENST00000508290 AP1S3Q96PC3 154 aa13.49□□□□□ -0.25
SFXN1-209ENST00000508290 TRBV20OR9-2A0A075B6H5 130 aa13.48□□□□□ -0.25
SFXN1-209ENST00000508290 RBFOX3A6NFN3 312 aa13.48□□□□□ -0.25
SFXN1-209ENST00000508290 F2Z2F3 143 aa13.48□□□□□ -0.25
SFXN1-209ENST00000508290 EREGO14944 169 aa13.48□□□□□ -0.25
SFXN1-209ENST00000508290 RPL36AP83881 106 aaKnown RBP13.48□□□□□ -0.25
SFXN1-209ENST00000508290 C14orf178Q8N769 122 aaPredicted RBP13.48□□□□□ -0.25
SFXN1-209ENST00000508290 RPL36ALQ969Q0 106 aaKnown RBP13.48□□□□□ -0.25
SFXN1-209ENST00000508290 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
SFXN1-209ENST00000508290 SMIM17P0DL12 118 aa13.47□□□□□ -0.25
SFXN1-209ENST00000508290 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
SFXN1-209ENST00000508290 CACNG7P62955 275 aa13.47□□□□□ -0.25
SFXN1-209ENST00000508290 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.47□□□□□ -0.25
SFXN1-209ENST00000508290 FER1L6-AS1Q8NA97 138 aa13.47□□□□□ -0.25
SFXN1-209ENST00000508290 PKD1P98161 4303 aa13.46□□□□□ -0.25
SFXN1-209ENST00000508290 A0A1B0GVG6 124 aa13.46□□□□□ -0.25
SFXN1-209ENST00000508290 LAGE3Q14657 143 aa13.46□□□□□ -0.25
SFXN1-209ENST00000508290 OR10G8Q8NGN5 311 aa13.46□□□□□ -0.25
SFXN1-209ENST00000508290 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
SFXN1-209ENST00000508290 C16orf90A8MZG2 172 aa13.45□□□□□ -0.26
SFXN1-209ENST00000508290 IBA57-AS1B1ANH7 110 aa13.45□□□□□ -0.26
SFXN1-209ENST00000508290 ZNF56Q15929 161 aa13.45□□□□□ -0.26
SFXN1-209ENST00000508290 PKHD1P08F94 4074 aa13.44□□□□□ -0.26
SFXN1-209ENST00000508290 NKX2-5P52952 324 aaPredicted RBP13.44□□□□□ -0.26
SFXN1-209ENST00000508290 TOR2AQ5JU69 321 aa13.43□□□□□ -0.26
SFXN1-209ENST00000508290 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
SFXN1-209ENST00000508290 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
SFXN1-209ENST00000508290 UBE2D3P61077 147 aa13.42□□□□□ -0.26
SFXN1-209ENST00000508290 UBE2D2P62837 147 aa13.42□□□□□ -0.26
SFXN1-209ENST00000508290 CHCHD7Q9BUK0 85 aa13.42□□□□□ -0.26
SFXN1-209ENST00000508290 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
SFXN1-209ENST00000508290 DNAH11Q96DT5 4516 aa13.42□□□□□ -0.26
SFXN1-209ENST00000508290 H7C1H1 209 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 TMEM97Q5BJF2 176 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 CDPF1Q6NVV7 123 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 EIF5A2Q9GZV4 153 aaKnown RBP13.41□□□□□ -0.26
SFXN1-209ENST00000508290 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
SFXN1-209ENST00000508290 PGPEP1Q9NXJ5 209 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 Q9UF83 564 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 URGCP-MRPS24S4R325 110 aa13.41□□□□□ -0.26
SFXN1-209ENST00000508290 F5H697 171 aa13.4□□□□□ -0.26
SFXN1-209ENST00000508290 OCC1Q8TAD7 63 aa13.4□□□□□ -0.26
SFXN1-209ENST00000508290 FAM210AQ96ND0 272 aa13.4□□□□□ -0.26
SFXN1-209ENST00000508290 KIF25-AS1Q9Y6Z4 181 aa13.4□□□□□ -0.26
SFXN1-209ENST00000508290 TRAV8-3A0A0A6YYJ7 113 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 GZMBP10144 247 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 CTRLP40313 264 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 PKIAP61925 76 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 TM2D2Q9BX73 214 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 CNFNQ9BYD5 112 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 TNFRSF18Q9Y5U5 241 aa13.39□□□□□ -0.27
SFXN1-209ENST00000508290 PSCAO43653 123 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 IGHV3-33P01772 117 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 IGHV3-30-3P0DP02 117 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 KCNIP4Q6PIL6 250 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 FAM231DQ6ZW35 169 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 DAZ4Q86SG3 579 aaKnown RBP13.38□□□□□ -0.27
SFXN1-209ENST00000508290 NEXN-AS1Q8NBZ9 246 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 DNAJC30Q96LL9 226 aa13.38□□□□□ -0.27
SFXN1-209ENST00000508290 DAZ3Q9NR90 486 aaKnown RBP13.38□□□□□ -0.27
SFXN1-209ENST00000508290 A0A087WTM6 91 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms