RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 GZMBP10144 247 aa13.28□□□□□ -0.28
LMNA-221ENST00000506981 UFSP1Q6NVU6 142 aa13.28□□□□□ -0.28
LMNA-221ENST00000506981 A0A1W2PPQ1 181 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 CRYGDP07320 174 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 SMIM17P0DL12 118 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 SSTP61278 116 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 Q6ZSN1 163 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 NUDT11Q96G61 164 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 AP1S3Q96PC3 154 aa13.27□□□□□ -0.29
LMNA-221ENST00000506981 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.29
LMNA-221ENST00000506981 GAGE12JA6NER3 117 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 ZNF727A8MUV8 499 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 K7EN84 100 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
LMNA-221ENST00000506981 IGLC6P0CF74 106 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 CACNG7P62955 275 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 GAGE1Q13065 139 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 GAGE4Q13068 117 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 GAGE5Q13069 117 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 ZNF56Q15929 161 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 GAGE13Q4V321 117 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 C6orf223Q8N319 242 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
LMNA-221ENST00000506981 RNASE7Q9H1E1 156 aaKnown RBP13.26□□□□□ -0.29
LMNA-221ENST00000506981 F2Z2F3 143 aa13.25□□□□□ -0.29
LMNA-221ENST00000506981 RTL8CO15255 209 aa13.25□□□□□ -0.29
LMNA-221ENST00000506981 TIRAPP58753 221 aa13.25□□□□□ -0.29
LMNA-221ENST00000506981 C14orf178Q8N769 122 aaPredicted RBP13.25□□□□□ -0.29
LMNA-221ENST00000506981 LY96Q9Y6Y9 160 aa13.25□□□□□ -0.29
LMNA-221ENST00000506981 PRSS29PA6NIE9 313 aa13.24□□□□□ -0.29
LMNA-221ENST00000506981 PEA15Q15121 130 aa13.24□□□□□ -0.29
LMNA-221ENST00000506981 TRAV9-2A0A087WT02 112 aa13.23□□□□□ -0.29
LMNA-221ENST00000506981 TRAV8-6A0A0B4J262 113 aa13.23□□□□□ -0.29
LMNA-221ENST00000506981 GATCO43716 136 aaKnown RBP13.23□□□□□ -0.29
LMNA-221ENST00000506981 RAB4BP61018 213 aa13.23□□□□□ -0.29
LMNA-221ENST00000506981 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
LMNA-221ENST00000506981 GTSF1LQ9H1H1 148 aa13.23□□□□□ -0.29
LMNA-221ENST00000506981 TRBV10-1A0A0K0K1A3 114 aa13.22□□□□□ -0.29
LMNA-221ENST00000506981 F5H697 171 aa13.22□□□□□ -0.29
LMNA-221ENST00000506981 EVI2AP22794 236 aa13.22□□□□□ -0.29
LMNA-221ENST00000506981 ERVFC1-1P60608 527 aa13.22□□□□□ -0.29
LMNA-221ENST00000506981 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
LMNA-221ENST00000506981 FAM231DQ6ZW35 169 aa13.22□□□□□ -0.29
LMNA-221ENST00000506981 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
LMNA-221ENST00000506981 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
LMNA-221ENST00000506981 TRGC1P0CF51 173 aa13.21□□□□□ -0.29
LMNA-221ENST00000506981 RAB14P61106 215 aa13.21□□□□□ -0.29
LMNA-221ENST00000506981 FAM74A3Q4VXF1 159 aa13.21□□□□□ -0.29
LMNA-221ENST00000506981 LYZL1Q6UWQ5 148 aa13.21□□□□□ -0.29
LMNA-221ENST00000506981 KRTAP1-5Q9BYS1 174 aa13.21□□□□□ -0.29
LMNA-221ENST00000506981 SMDT1Q9H4I9 107 aa13.21□□□□□ -0.29
LMNA-221ENST00000506981 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
LMNA-221ENST00000506981 BTF3P20290 206 aaKnown RBP13.2□□□□□ -0.3
LMNA-221ENST00000506981 CTRLP40313 264 aa13.2□□□□□ -0.3
LMNA-221ENST00000506981 LELP1Q5T871 98 aa13.2□□□□□ -0.3
LMNA-221ENST00000506981 LINC01551Q86U37 167 aa13.2□□□□□ -0.3
LMNA-221ENST00000506981 A8MWL6 223 aa13.19□□□□□ -0.3
LMNA-221ENST00000506981 K7EP13 123 aa13.19□□□□□ -0.3
LMNA-221ENST00000506981 MGPP08493 103 aa13.19□□□□□ -0.3
LMNA-221ENST00000506981 DNAH10Q8IVF4 4471 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 TRBV7-3A0A075B6L6 115 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 A0A087WWC5 75 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 IGHV3-38A0A0C4DH36 116 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 DNAH10OSP0CZ25 163 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 WDR73Q6P4I2 378 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 C10orf126Q8N4M7 172 aa13.18□□□□□ -0.3
LMNA-221ENST00000506981 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.18□□□□□ -0.3
LMNA-221ENST00000506981 TMEM241Q24JQ0 296 aa13.17□□□□□ -0.3
LMNA-221ENST00000506981 CT83Q5H943 113 aa13.17□□□□□ -0.3
LMNA-221ENST00000506981 C15orf54Q8N8G6 183 aa13.17□□□□□ -0.3
LMNA-221ENST00000506981 MSRB1Q9NZV6 116 aa13.17□□□□□ -0.3
LMNA-221ENST00000506981 Q9UF83 564 aa13.17□□□□□ -0.3
LMNA-221ENST00000506981 NTF3P20783 257 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 LINC00315P59091 139 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 TWIST1Q15672 202 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 BORCS7Q96B45 105 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 KIF25-AS1Q9Y6Z4 181 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 FRAS1Q86XX4 4008 aa13.16□□□□□ -0.3
LMNA-221ENST00000506981 H7C1H1 209 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 SRSF3P84103 164 aaKnown RBP13.15□□□□□ -0.3
LMNA-221ENST00000506981 ADIRFQ15847 76 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 SMIM15Q7Z3B0 74 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 OR10G8Q8NGN5 311 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 CNFNQ9BYD5 112 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 DPH3P1Q9H4G8 78 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 NAT8Q9UHE5 227 aa13.15□□□□□ -0.3
LMNA-221ENST00000506981 EPPK1P58107 5090 aaKnown RBP13.15□□□□□ -0.3
LMNA-221ENST00000506981 C9JQL5 133 aa13.14□□□□□ -0.31
LMNA-221ENST00000506981 UBE2D3P61077 147 aa13.14□□□□□ -0.31
LMNA-221ENST00000506981 UBE2D2P62837 147 aa13.14□□□□□ -0.31
LMNA-221ENST00000506981 LINC01556Q5JQF7 62 aa13.14□□□□□ -0.31
LMNA-221ENST00000506981 NFE4Q86UQ8 179 aa13.14□□□□□ -0.31
LMNA-221ENST00000506981 NEXN-AS1Q8NBZ9 246 aa13.14□□□□□ -0.31
LMNA-221ENST00000506981 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
LMNA-221ENST00000506981 PGLYRP4Q96LB8 373 aa13.13□□□□□ -0.31
LMNA-221ENST00000506981 RPL23P62829 140 aaKnown RBP13.12□□□□□ -0.31
LMNA-221ENST00000506981 TNP2Q05952 138 aa13.12□□□□□ -0.31
LMNA-221ENST00000506981 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms