RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CIRBPQ14011 172 aaKnown RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBMY1FQ15415 496 aaKnown RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RHOHQ15669 191 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 IL17AQ16552 155 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 ESRGQ1W209 222 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 SPANXN1Q5VSR9 72 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 C16orf47Q6ZP98 133 aaPredicted RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 GPHB5Q86YW7 130 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RPRMLQ8N4K4 120 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 FAM216BQ8N7L0 139 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 C3orf56Q8N813 242 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF491Q8N8L2 437 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC01555Q8NAE3 123 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 CCL4L1Q8NHW4 92 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 CHCHD10Q8WYQ3 142 aaPredicted RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00467Q9BRT7 94 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 NPCDR1Q9BY65 106 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 PLA2G12AQ9BZM1 189 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00597Q9H2U6 94 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q9H3A6 140 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 PLXNA1Q9UIW2 1896 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 SCN8AQ9UQD0 1980 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 KIAA1671Q9BY89 1806 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 TNRC6CQ9HCJ0 1690 aaKnown RBP1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 HEATR5AQ86XA9 2040 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 PTPRDP23468 1912 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 ARID1AO14497 2285 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRAV7A0A075B6U4 112 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV3OR16-12A0A075B7B8 117 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGLV3-32A0A0A0MS00 114 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV1-45A0A0A0MS14 117 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV7-1A0A0A6YYK4 115 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1D-43A0A0B4J1Z2 117 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC01546A6NGU7 62 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 EPOPA6NHQ4 379 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC01549A6NIU2 74 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 A6NN06 94 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 C11orf94C9JXX5 98 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 PEX7O00628 323 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV4-34P06331 123 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 COX6CP09669 75 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 RNASE2P10153 161 aaKnown RBP1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 S100A3P33764 101 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 XCL1P47992 114 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 KRTAP10-10P60014 251 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 SUPT4H1P63272 117 aaKnown RBP1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBM3P98179 157 aaKnown RBP1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 PLGLAQ15195 96 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF826PQ6ZT77 177 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 FAM19A2Q8N3H0 131 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 RNASE6Q93091 150 aaKnown RBP1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZC2HC1AQ96GY0 325 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 FAM167A-AS1Q96KT0 104 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 TAC3Q9UHF0 121 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 V9GYV3 84 aa1.35□□□□□ -2.19
HMGB3P17-201ENST00000504195 DLG5Q8TDM6 1919 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 SCN10AQ9Y5Y9 1956 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 LTBP2Q14767 1821 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1D-17A0A075B6S4 117 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV5-4A0A0C4DH59 114 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 LOC107984156A0A0G2JMH3 177 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 A0A0G2JRQ6 117 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 A6NIN4 97 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 C3orf84H3BNL1 204 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 K7ERJ3 54 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 GIG44P09565 113 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV3-43DP0DP04 118 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 MGST1P10620 155 aaKnown RBP1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 HMGA1P17096 107 aaKnown RBP1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 PLNP26678 52 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 FXYD7P58549 80 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF816Q0VGE8 651 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 SS18Q15532 418 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 KISS1Q15726 138 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 CEMP1Q6PRD7 247 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 LYPD5Q6UWN5 251 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 PATE2Q6UY27 113 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 MIR17HGQ75NE6 70 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 ARL17AQ8IVW1 177 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 FLVCR1-AS1Q8TAF5 88 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 WFDC5Q8TCV5 224 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 CLEC2BQ92478 149 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 FAM104AQ969W3 186 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 TMEM141Q96I45 108 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 SCGB3A1Q96QR1 104 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 LIMD2Q9BT23 127 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 PRO1854Q9UHT4 67 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 UBE2D4Q9Y2X8 147 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 PHLDA3Q9Y5J5 127 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 OBSL1O75147 1896 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 NACAE9PAV3 2078 aa1.34□□□□□ -2.19
HMGB3P17-201ENST00000504195 COL11A1P12107 1806 aaPredicted RBP1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 NUP98P52948 1817 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF236Q9UL36 1845 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 RALGAPA2Q2PPJ7 1873 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ANKRD36A6QL64 1941 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-27A0A075B6S5 117 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV1OR15-1A0A075B7D0 117 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV7-81A0A0B4J1V7 117 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms