RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 DNHD1Q96M86 4753 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 TRAV26-2A0A0B4J265 109 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 KIR2DL5BA0A0G2JN68 375 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 KIR2DL5BA0A0G2JPC4 375 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 D6R8Y8 96 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 UBE2CO00762 179 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 CRYGDP07320 174 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 ZNF415Q09FC8 603 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 Q0VG73 95 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 KPRPQ5T749 579 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 UFSP1Q6NVU6 142 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 KIR2DL5AQ8N109 375 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 C14orf178Q8N769 122 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 KIR2DL5BQ8NHK3 375 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 TMEM263Q8WUH6 116 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 C1QTNF4Q9BXJ3 329 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 MRPL16Q9NX20 251 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 GOLT1BQ9Y3E0 138 aa4.96□□□□□ -1.62
TOPBP1-203ENST00000503464 A0A087WWL8 130 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 A8MZ25 164 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 SERF1AO75920 110 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 NPYP01303 97 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 HOXA5P20719 270 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 DEFB135Q30KP9 77 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 ZNF876PQ49A33 203 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 OR10J3Q5JRS4 329 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 HIST3H2BBQ8N257 126 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 NRACQ8N912 160 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 PTH2Q96A98 100 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 AP1S3Q96PC3 154 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 TMEM208Q9BTX3 173 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 NOTCH1P46531 2555 aa4.95□□□□□ -1.62
TOPBP1-203ENST00000503464 M0R2P5 195 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 PRB2P02812 416 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 ESDP10768 282 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 APOC4P55056 127 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 PDZD11Q5EBL8 140 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 PIK3CD-AS1Q5SR53 167 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 Q6ZTI0 123 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 ORMDL3Q8N138 153 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 RASL10AQ92737 203 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 C16orf74Q96GX8 76 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 PRELID3AQ96N28 172 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 DPH3P1Q9H4G8 78 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 NBEAL1Q6ZS30 2694 aa4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 HUWE1Q7Z6Z7 4374 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-203ENST00000503464 IGLV2-18A0A075B6J9 118 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 RS1O15537 224 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 S100A6P06703 90 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 MGPP08493 103 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 CKS2P33552 79 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 RIPPLY3P57055 190 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 DAZ2Q13117 558 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 RRN3P1Q2M238 152 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 CFAP126Q5VTH2 177 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 SUMO4Q6EEV6 95 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 Q6ZSN1 163 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 Q8NAQ8 132 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 SYT8Q8NBV8 401 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 MRAP2Q96G30 205 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 HIST1H2BLQ99880 126 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 OVOL2Q9BRP0 275 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 SPXQ9BT56 116 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 RETNQ9HD89 108 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 NOP10Q9NPE3 64 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 MGAM2Q2M2H8 2515 aa4.93□□□□□ -1.62
TOPBP1-203ENST00000503464 NBEAL2Q6ZNJ1 2754 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 K7EIL1 84 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 M0QY20 66 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 TNFRSF6BO95407 300 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 PPBPP02775 128 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 IFI27P40305 119 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 FAM74A4Q5TZK3 123 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 SMIM15Q7Z3B0 74 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 NIT1Q86X76 327 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 BAGE3Q86Y29 109 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 LINC00612Q8N6U2 182 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 RNF183Q96D59 192 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 Q9UF83 564 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 TENM3Q9P273 2699 aa4.92□□□□□ -1.62
TOPBP1-203ENST00000503464 DNAH9Q9NYC9 4486 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 A0A096LNJ9 63 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 IGHV3-73A0A0B4J1V6 119 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 IGHV4-28A0A0C4DH34 117 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 LINC01546A6NGU7 62 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 SMIM9A6NGZ8 99 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 PRSS47A8MTI9 375 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 A8MWV9 139 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 PMCHL1Q16048 86 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 LGALS9BQ3B8N2 356 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 RNASEKQ6P5S7 137 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 Q6ZWC4 215 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 OR11H2Q8NH07 326 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 ZNF479Q96JC4 524 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 NDUFAF3Q9BU61 184 aa4.91□□□□□ -1.62
TOPBP1-203ENST00000503464 EDA2RQ9HAV5 297 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms