RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 A0A087WWL8 130 aa12.52□□□□□ -0.41
PDLIM7-209ENST00000503346 GZMBP10144 247 aa12.52□□□□□ -0.41
PDLIM7-209ENST00000503346 TIRAPP58753 221 aa12.52□□□□□ -0.41
PDLIM7-209ENST00000503346 SPANXN1Q5VSR9 72 aa12.52□□□□□ -0.41
PDLIM7-209ENST00000503346 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
PDLIM7-209ENST00000503346 FER1L6-AS1Q8NA97 138 aa12.51□□□□□ -0.41
PDLIM7-209ENST00000503346 SMIM7Q9BQ49 75 aa12.51□□□□□ -0.41
PDLIM7-209ENST00000503346 FRAS1Q86XX4 4008 aa12.51□□□□□ -0.41
PDLIM7-209ENST00000503346 RNASE7Q9H1E1 156 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-209ENST00000503346 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-209ENST00000503346 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 ZNF727A8MUV8 499 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 F2Z2F3 143 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 FAM231DQ6ZW35 169 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
PDLIM7-209ENST00000503346 FAT2Q9NYQ8 4349 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 RTL8CO15255 209 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 SIVA1O15304 175 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 LINC00694P0DN24 101 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 CACNG7P62955 275 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 PEA15Q15121 130 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 LINC00336Q6ZUF6 198 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 LINC01551Q86U37 167 aa12.48□□□□□ -0.41
PDLIM7-209ENST00000503346 C9JQL5 133 aa12.47□□□□□ -0.41
PDLIM7-209ENST00000503346 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-209ENST00000503346 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
PDLIM7-209ENST00000503346 Q9UF83 564 aa12.47□□□□□ -0.41
PDLIM7-209ENST00000503346 BIRC6Q9NR09 4857 aa12.47□□□□□ -0.41
PDLIM7-209ENST00000503346 GAGE12JA6NER3 117 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 CTRLP40313 264 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 RAB4BP61018 213 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 SSTP61278 116 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 GAGE1Q13065 139 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 GAGE4Q13068 117 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 GAGE5Q13069 117 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 FAM74A3Q4VXF1 159 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 SOHLH1Q5JUK2 328 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 LYZL1Q6UWQ5 148 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 ATP6V0E2Q8NHE4 81 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 AP1S3Q96PC3 154 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 KRTAP1-5Q9BYS1 174 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.41
PDLIM7-209ENST00000503346 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
PDLIM7-209ENST00000503346 GATCO43716 136 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-209ENST00000503346 WDR73Q6P4I2 378 aa12.45□□□□□ -0.42
PDLIM7-209ENST00000503346 GTSF1LQ9H1H1 148 aa12.45□□□□□ -0.42
PDLIM7-209ENST00000503346 BTF3P20290 206 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-209ENST00000503346 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
PDLIM7-209ENST00000503346 CT83Q5H943 113 aa12.44□□□□□ -0.42
PDLIM7-209ENST00000503346 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
PDLIM7-209ENST00000503346 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
PDLIM7-209ENST00000503346 MSRB1Q9NZV6 116 aa12.44□□□□□ -0.42
PDLIM7-209ENST00000503346 SMIM17P0DL12 118 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 LINC00315P59091 139 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 RAB14P61106 215 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 ZNF56Q15929 161 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 LELP1Q5T871 98 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 WFDC10BQ8IUB3 73 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
PDLIM7-209ENST00000503346 A8MWL6 223 aa12.42□□□□□ -0.42
PDLIM7-209ENST00000503346 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
PDLIM7-209ENST00000503346 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
PDLIM7-209ENST00000503346 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
PDLIM7-209ENST00000503346 OSTCQ9NRP0 149 aa12.42□□□□□ -0.42
PDLIM7-209ENST00000503346 TRGC1P0CF51 173 aa12.41□□□□□ -0.42
PDLIM7-209ENST00000503346 NTF3P20783 257 aa12.41□□□□□ -0.42
PDLIM7-209ENST00000503346 FOXA3P55318 350 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-209ENST00000503346 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-209ENST00000503346 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-209ENST00000503346 NAT8Q9UHE5 227 aa12.41□□□□□ -0.42
PDLIM7-209ENST00000503346 TRBV7-3A0A075B6L6 115 aa12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 PRSS29PA6NIE9 313 aa12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 K7EP13 123 aa12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 RPL23P62829 140 aaKnown RBP12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 ISOC2Q96AB3 205 aa12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 HECTD4Q9Y4D8 3996 aa12.4□□□□□ -0.42
PDLIM7-209ENST00000503346 TRAV9-2A0A087WT02 112 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 F5H697 171 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 UBE2D3P61077 147 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 UBE2D2P62837 147 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 CLLU1Q5K131 121 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 NEXN-AS1Q8NBZ9 246 aa12.39□□□□□ -0.43
PDLIM7-209ENST00000503346 A0A087WWC5 75 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 EVI2AP22794 236 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 IFITM2Q01629 132 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 TWIST1Q15672 202 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 LINC01556Q5JQF7 62 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 C15orf54Q8N8G6 183 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 TSKUQ8WUA8 353 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 GFRA4Q9GZZ7 299 aa12.38□□□□□ -0.43
PDLIM7-209ENST00000503346 DPH3P1Q9H4G8 78 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms