RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
PDGFC-203ENST00000502773 APRG1Q8IVJ8 170 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 RETNQ9HD89 108 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.63□□□□□ -1.51
PDGFC-203ENST00000502773 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 LINC00527Q9UJ94 153 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 RHODO00212 210 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 SLC25A20O43772 301 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 SZT2Q5T011 3432 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 BLCAPP62952 87 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 CFHR3Q02985 330 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 RRN3P1Q2M238 152 aa5.63□□□□□ -1.51
PDGFC-203ENST00000502773 RNF223E7ERA6 249 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV4-59P01825 116 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 CD7P09564 240 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 TRPT1Q86TN4 253 aaKnown RBP5.62□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV1OR15-1A0A075B7D0 117 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 PRAC2D3DTV9 90 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 ZNF80P51504 273 aaPredicted RBP5.62□□□□□ -1.51
PDGFC-203ENST00000502773 RHOHQ15669 191 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 KHDC1LQ5JSQ8 128 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 UFSP1Q6NVU6 142 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 CEND1Q8N111 149 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 HIGD1BQ9P298 99 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 TLN1Q9Y490 2541 aaKnown RBP5.62□□□□□ -1.51
PDGFC-203ENST00000502773 IGKV3D-20A0A0C4DH25 116 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 LINC01548A6NM66 108 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV4-31P0DP07 118 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 HLA-DMBP28068 263 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 HIST1H4AP62805 103 aaKnown RBP5.62□□□□□ -1.51
PDGFC-203ENST00000502773 Q8N976 141 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 WFDC11Q8NEX6 87 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 C4orf3Q8WVX3 66 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 TMEM158Q8WZ71 300 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 TRIOO75962 3097 aa5.62□□□□□ -1.51
PDGFC-203ENST00000502773 ATRXP46100 2492 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 MORN3Q6PF18 240 aaPredicted RBP5.61□□□□□ -1.51
PDGFC-203ENST00000502773 NRGNQ92686 78 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 MYO15AQ9UKN7 3530 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 TINCRA0A1B0GVN0 87 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 H3BMM0 161 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 SOCS3O14543 225 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 RPL35AP18077 110 aaKnown RBP5.61□□□□□ -1.51
PDGFC-203ENST00000502773 C1orf195Q5TG92 126 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 ZFAND2AQ8N6M9 145 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 UBE2WQ96B02 151 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 NAV3Q8IVL0 2385 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 TRAV4A0A0B4J268 109 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 KLLNB2CW77 178 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 ZNF843Q8N446 348 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 DUX3Q96PT4 197 aa5.61□□□□□ -1.51
PDGFC-203ENST00000502773 A0A087WX48 190 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 TRAV13-1A0A0B4J241 112 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 K7EQG2 157 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 IGHV4OR15-8A0A075B7B6 117 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 A0A087WW49 117 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 A0A0J9YX75 114 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 Q8N2B8 174 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 ANKRD29Q8N6D5 301 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 RNF185Q96GF1 192 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 UNQ9165/PRO28630Q6UXU0 137 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 COPS9Q8WXC6 57 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 Q96MF0 132 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 SPTBN2O15020 2390 aa5.6□□□□□ -1.51
PDGFC-203ENST00000502773 IGKV3-7A0A075B6H7 116 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 F8VRH5 84 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 NXPH4O95158 308 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 HOXD3P31249 432 aaPredicted RBP5.59□□□□□ -1.51
PDGFC-203ENST00000502773 ZNF292O60281 2723 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 NCR2O95944 276 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 LGALS3P17931 250 aaKnown RBP5.59□□□□□ -1.51
PDGFC-203ENST00000502773 SYNJ2BPP57105 145 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 COL6A6A6NMZ7 2263 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 INSP01308 110 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 URB1-AS1Q96HZ7 61 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 FAM19A4Q96LR4 140 aa5.59□□□□□ -1.51
PDGFC-203ENST00000502773 TRBV6-5A0A0K0K1A5 114 aa5.59□□□□□ -1.52
PDGFC-203ENST00000502773 NDUFC2O95298 119 aa5.59□□□□□ -1.52
PDGFC-203ENST00000502773 FSHBP01225 129 aa5.59□□□□□ -1.52
PDGFC-203ENST00000502773 PRB4P10163 310 aaPredicted RBP5.59□□□□□ -1.52
PDGFC-203ENST00000502773 PLXNB1O43157 2135 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 TRBV25-1A0A075B6N4 114 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 J3QKU1 62 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 NDUFA7O95182 113 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 C14orf178Q8N769 122 aaPredicted RBP5.58□□□□□ -1.52
PDGFC-203ENST00000502773 TIMM17AQ99595 171 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 NOTCH3Q9UM47 2321 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 SPTBN5Q9NRC6 3674 aaKnown RBP5.58□□□□□ -1.52
PDGFC-203ENST00000502773 RBM3P98179 157 aaKnown RBP5.58□□□□□ -1.52
PDGFC-203ENST00000502773 LINC00467Q9BRT7 94 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 KLK5Q9Y337 293 aaPredicted RBP5.58□□□□□ -1.52
PDGFC-203ENST00000502773 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
PDGFC-203ENST00000502773 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
PDGFC-203ENST00000502773 ATXN8Q156A1 80 aa5.57□□□□□ -1.52
PDGFC-203ENST00000502773 C2orf66Q6UXQ4 117 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms