RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
AP004609.1-201ENST00000498872 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
AP004609.1-201ENST00000498872 DUSP14O95147 198 aaKnown RBP12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 LY6G6CO95867 125 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 RAB4AP20338 218 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 ASIPP42127 132 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 DEFB131AP59861 70 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 IGHV1-24A0A0C4DH33 117 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 PPBPP02775 128 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 CKS2P33552 79 aa12.37□□□□□ -0.43
AP004609.1-201ENST00000498872 C7orf71A4D174 169 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 LINC00587B1AMM8 73 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 C3orf79P0CE67 100 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 CMC4P56277 68 aaPredicted RBP12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 SPANXN1Q5VSR9 72 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 Q8N976 141 aa12.36□□□□□ -0.43
AP004609.1-201ENST00000498872 S100A4P26447 101 aaKnown RBP12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 CEMP1Q6PRD7 247 aaPredicted RBP12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 TEX43Q6ZNM6 134 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 ZNF664Q8N3J9 261 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 PRSS3P2Q8NHM4 247 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 SCRT2Q9NQ03 307 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 LAMTOR2Q9Y2Q5 125 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 AGRNO00468 2067 aa12.35□□□□□ -0.43
AP004609.1-201ENST00000498872 DEFB4AO15263 64 aa12.34□□□□□ -0.43
AP004609.1-201ENST00000498872 TSPOP30536 169 aa12.34□□□□□ -0.43
AP004609.1-201ENST00000498872 PMCHL1Q16048 86 aa12.34□□□□□ -0.43
AP004609.1-201ENST00000498872 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
AP004609.1-201ENST00000498872 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
AP004609.1-201ENST00000498872 SMKR1H3BMG3 65 aa12.33□□□□□ -0.43
AP004609.1-201ENST00000498872 NCR2O95944 276 aa12.33□□□□□ -0.43
AP004609.1-201ENST00000498872 NPYP01303 97 aa12.33□□□□□ -0.43
AP004609.1-201ENST00000498872 EVI2AP22794 236 aa12.33□□□□□ -0.43
AP004609.1-201ENST00000498872 OR11H2Q8NH07 326 aa12.33□□□□□ -0.43
AP004609.1-201ENST00000498872 TIMM8BQ9Y5J9 83 aaPredicted RBP12.33□□□□□ -0.43
AP004609.1-201ENST00000498872 IFI27P40305 119 aaPredicted RBP12.33□□□□□ -0.44
AP004609.1-201ENST00000498872 FAM159AQ6UWV7 190 aa12.33□□□□□ -0.44
AP004609.1-201ENST00000498872 BIRC6Q9NR09 4857 aa12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 GNRH2O43555 120 aa12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 RNASE3P12724 160 aaKnown RBP12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 CDKN1BP46527 198 aa12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 PHLDA1Q8WV24 401 aaPredicted RBP12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 PHLDA3Q9Y5J5 127 aa12.32□□□□□ -0.44
AP004609.1-201ENST00000498872 LOC389332A0A1B0GUA5 103 aa12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 AMTNQ6UX39 209 aa12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 STHQ8IWL8 128 aa12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 KLK5Q9Y337 293 aaPredicted RBP12.31□□□□□ -0.44
AP004609.1-201ENST00000498872 KNCNA6PVL3 124 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 A8MTW9 85 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 M0R381 172 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 NXPH4O95158 308 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 HLA-DRB4P13762 266 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 HLA-DRB4X5D2U9 266 aa12.3□□□□□ -0.44
AP004609.1-201ENST00000498872 TNFRSF6BO95407 300 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 HSPB8Q9UJY1 196 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 DDTP30046 118 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 C11orf45Q8TAV5 145 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 VAMP8Q9BV40 100 aa12.29□□□□□ -0.44
AP004609.1-201ENST00000498872 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
AP004609.1-201ENST00000498872 MRAP2Q96G30 205 aa12.28□□□□□ -0.44
AP004609.1-201ENST00000498872 LINC01546A6NGU7 62 aa12.27□□□□□ -0.44
AP004609.1-201ENST00000498872 H3BMM0 161 aa12.27□□□□□ -0.44
AP004609.1-201ENST00000498872 CRXO43186 299 aaPredicted RBP12.27□□□□□ -0.44
AP004609.1-201ENST00000498872 LINC00173Q6ZV60 143 aa12.27□□□□□ -0.44
AP004609.1-201ENST00000498872 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.44
AP004609.1-201ENST00000498872 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.44
AP004609.1-201ENST00000498872 IGHV1OR15-1A0A075B7D0 117 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 GIG44P09565 113 aaPredicted RBP12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 GATA1P15976 413 aaPredicted RBP12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 NRACQ8N912 160 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 AP1S3Q96PC3 154 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 NXT2Q9NPJ8 142 aaKnown RBP12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 A0A096LNJ9 63 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 IGHV3-16A0A0C4DH30 117 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 SYS1-DBNDD2H3BUS1 97 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 C9orf85Q96MD7 179 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 C20orf144Q9BQM9 153 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
AP004609.1-201ENST00000498872 FRAS1Q86XX4 4008 aa12.25□□□□□ -0.45
AP004609.1-201ENST00000498872 TRAV26-2A0A0B4J265 109 aa12.25□□□□□ -0.45
AP004609.1-201ENST00000498872 PRSS47A8MTI9 375 aa12.25□□□□□ -0.45
AP004609.1-201ENST00000498872 Q8NAQ8 132 aa12.25□□□□□ -0.45
AP004609.1-201ENST00000498872 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms