RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
HDAC6-236ENST00000498808 C5orf17Q8NAS9 161 aa9.83□□□□□ -0.84
HDAC6-236ENST00000498808 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
HDAC6-236ENST00000498808 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
HDAC6-236ENST00000498808 TRBV10-1A0A0K0K1A3 114 aa9.82□□□□□ -0.84
HDAC6-236ENST00000498808 HMGB3O15347 200 aaKnown RBP9.82□□□□□ -0.84
HDAC6-236ENST00000498808 LYRM1O43325 122 aa9.82□□□□□ -0.84
HDAC6-236ENST00000498808 RPL36AP83881 106 aaKnown RBP9.82□□□□□ -0.84
HDAC6-236ENST00000498808 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
HDAC6-236ENST00000498808 RPL36ALQ969Q0 106 aaKnown RBP9.82□□□□□ -0.84
HDAC6-236ENST00000498808 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
HDAC6-236ENST00000498808 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
HDAC6-236ENST00000498808 SLPIP03973 132 aa9.81□□□□□ -0.84
HDAC6-236ENST00000498808 LRRC37A5PQ49AS3 106 aa9.81□□□□□ -0.84
HDAC6-236ENST00000498808 CLRN3Q8NCR9 226 aa9.81□□□□□ -0.84
HDAC6-236ENST00000498808 IGHV3-64A0A075B6Q5 118 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 K7EQM0 130 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 SIX6O95475 246 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 RAB2AP61019 212 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 PRR3P79522 188 aaKnown RBP9.8□□□□□ -0.84
HDAC6-236ENST00000498808 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 SFRP2Q96HF1 295 aa9.8□□□□□ -0.84
HDAC6-236ENST00000498808 A0A1W2PPV4 95 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 hDV102S1A0JD36 115 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 PTTG1O95997 202 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 ARL14EPLP0DKL9 152 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 OR11H4Q8NGC9 324 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 OR10G8Q8NGN5 311 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
HDAC6-236ENST00000498808 CCDC160A6NGH7 325 aa9.78□□□□□ -0.84
HDAC6-236ENST00000498808 H2AFB2P0C5Z0 115 aa9.78□□□□□ -0.84
HDAC6-236ENST00000498808 SAPCD1Q5SSQ6 148 aa9.78□□□□□ -0.84
HDAC6-236ENST00000498808 DNLZQ5SXM8 178 aa9.78□□□□□ -0.84
HDAC6-236ENST00000498808 SCGB1C1Q8TD33 95 aa9.78□□□□□ -0.84
HDAC6-236ENST00000498808 RBM38Q9H0Z9 239 aaKnown RBP9.78□□□□□ -0.84
HDAC6-236ENST00000498808 EPDR1Q9UM22 224 aa9.78□□□□□ -0.84
HDAC6-236ENST00000498808 FABP5P3A8MUU1 101 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 B4DEV8 164 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 RBX1P62877 108 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 SUMO1P63165 101 aaKnown RBP9.77□□□□□ -0.85
HDAC6-236ENST00000498808 LINC00269Q8N2A0 174 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 NEXN-AS1Q8NBZ9 246 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 SMIM3Q9BZL3 60 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
HDAC6-236ENST00000498808 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 M0R381 172 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 SUN5Q8TC36 379 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 GTSF1Q8WW33 167 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 ARL2-SNX15V9GYD0 113 aa9.76□□□□□ -0.85
HDAC6-236ENST00000498808 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-236ENST00000498808 TRAV34A0A0B4J273 112 aa9.75□□□□□ -0.85
HDAC6-236ENST00000498808 KRBOX1C9JBD0 128 aa9.75□□□□□ -0.85
HDAC6-236ENST00000498808 M0R036 132 aa9.75□□□□□ -0.85
HDAC6-236ENST00000498808 PKIAP61925 76 aa9.75□□□□□ -0.85
HDAC6-236ENST00000498808 WFDC1Q9HC57 220 aa9.75□□□□□ -0.85
HDAC6-236ENST00000498808 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
HDAC6-236ENST00000498808 MUC2Q02817 5179 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 MUC21A0A0G2JKD1 596 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 STAG3L2P0CL84 134 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 STAG3L3P0CL85 134 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 GCHFRP30047 84 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 CRIP1P50238 77 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 REG3GQ6UW15 175 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
HDAC6-236ENST00000498808 CDC34P49427 236 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-236ENST00000498808 GAGE6Q13070 117 aa9.73□□□□□ -0.85
HDAC6-236ENST00000498808 PRR27Q6MZM9 219 aa9.73□□□□□ -0.85
HDAC6-236ENST00000498808 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
HDAC6-236ENST00000498808 TPT1P13693 172 aaKnown RBP9.72□□□□□ -0.85
HDAC6-236ENST00000498808 COX6A2Q02221 97 aa9.72□□□□□ -0.85
HDAC6-236ENST00000498808 REG3AQ06141 175 aa9.72□□□□□ -0.85
HDAC6-236ENST00000498808 ZFP82Q8N141 532 aa9.72□□□□□ -0.85
HDAC6-236ENST00000498808 KRTAP9-6A0A140TA67 174 aa9.71□□□□□ -0.86
HDAC6-236ENST00000498808 SH2D1AO60880 128 aa9.71□□□□□ -0.86
HDAC6-236ENST00000498808 RAB4BP61018 213 aa9.71□□□□□ -0.86
HDAC6-236ENST00000498808 MAJINQ3KP22 176 aa9.71□□□□□ -0.86
HDAC6-236ENST00000498808 Q86TA4 180 aa9.71□□□□□ -0.86
HDAC6-236ENST00000498808 PPP1R1CQ8WVI7 109 aa9.71□□□□□ -0.86
HDAC6-236ENST00000498808 RPL12P30050 165 aaKnown RBP9.7□□□□□ -0.86
HDAC6-236ENST00000498808 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
HDAC6-236ENST00000498808 ZNF56Q15929 161 aa9.7□□□□□ -0.86
HDAC6-236ENST00000498808 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
HDAC6-236ENST00000498808 LYPD6BQ8NI32 183 aa9.7□□□□□ -0.86
HDAC6-236ENST00000498808 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
HDAC6-236ENST00000498808 VAX2Q9UIW0 290 aa9.7□□□□□ -0.86
HDAC6-236ENST00000498808 TMSB15BA0A087X1C1 80 aa9.69□□□□□ -0.86
HDAC6-236ENST00000498808 IGKV2-24A0A0C4DH68 120 aa9.69□□□□□ -0.86
HDAC6-236ENST00000498808 H2BFSP57053 126 aa9.69□□□□□ -0.86
HDAC6-236ENST00000498808 CYCSP99999 105 aaKnown RBP9.69□□□□□ -0.86
HDAC6-236ENST00000498808 STPG4Q8N801 248 aa9.69□□□□□ -0.86
HDAC6-236ENST00000498808 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-236ENST00000498808 C20orf203Q8NBC4 194 aa9.69□□□□□ -0.86
HDAC6-236ENST00000498808 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 FAM240BA0A1B0GVZ2 78 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 NDUFS6O75380 124 aaKnown RBP9.68□□□□□ -0.86
HDAC6-236ENST00000498808 MPC2O95563 127 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms