RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IGLV3-1P01715 115 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 CCKP06307 115 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 COX7BP24311 80 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LMO2P25791 158 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 RPL22P35268 128 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 COPZ1P61923 177 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 CD164L2Q6UWJ8 174 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP5-5Q701N2 237 aaPredicted RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 SMIM15Q7Z3B0 74 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SPATA12Q7Z6I5 190 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 OR10G8Q8NGN5 311 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 CIRBP-AS1Q8TBR5 109 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 MAFIPQ8WZ33 124 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 EFCAB11Q9BUY7 163 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 NUP205Q92621 2012 aa0.96□□□□□ -2.25
XRN1-214ENST00000498077 HYDINQ4G0P3 5121 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 DMXL1Q9Y485 3027 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 A0A1B0GW64 132 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 FTCDNL1E5RQL4 147 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 TRACP01848 142 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 TSPAN19P0C672 248 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 COX8AP10176 69 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 CBLN1P23435 193 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 TSPOP30536 169 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 EFNA3P52797 238 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 UBE2G2P60604 165 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 PP632Q6XCG6 107 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 NKAIN3Q8N8D7 197 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 S100ZQ8WXG8 99 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 SND1-IT1Q9HBX3 110 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 CCDC88CQ9P219 2028 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 HHLA3Q9XRX5 114 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 DLG5Q8TDM6 1919 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 MARCH11A6NNE9 402 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 SRRM5B3KS81 715 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 LRRN3E7EW58 273 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 H3BMG7 143 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 LANCL1O43813 399 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 IFI27P40305 119 aaPredicted RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 VAMP2P63027 116 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 NNATQ16517 81 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 RPRMLQ8N4K4 120 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 STAG3L4Q8TBR4 150 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 MRPL34Q9BQ48 92 aaKnown RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 ABCA13Q86UQ4 5058 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 FAM24AA6NFZ4 105 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP16-1A8MUX0 517 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 LMO7DNF2Z398 122 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 FABP7O15540 132 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 CLDN11O75508 207 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 LY6HO94772 140 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 SRIP30626 198 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 OPRK1P41145 380 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 ATP5OP48047 213 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 DLX1P56177 255 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 DMKNQ6E0U4 476 aaPredicted RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 TBPL2Q6SJ96 375 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 IGFL2Q6UWQ7 119 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 SCXQ7RTU7 201 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 FAM19A1Q7Z5A9 133 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 MIR7-3HGQ8N6C7 128 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 TXN2Q99757 166 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 PROK2Q9HC23 129 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 SAR1AQ9NR31 198 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 LEPROTO15243 131 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 GNRH2O43555 120 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 DUSP14O95147 198 aaKnown RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 ANGP03950 147 aaKnown RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 IL11P20809 199 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 GPX4P36969 197 aaPredicted RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 MOGQ16653 247 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 C10orf25Q5T742 122 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 C1orf162Q8NEQ5 155 aaPredicted RBP0.96□□□□□ -2.26
XRN1-214ENST00000498077 OR52B4Q8NGK2 314 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 THAP6Q8TBB0 222 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 HYLS1Q96M11 299 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 ARHGDIGQ99819 225 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 TMEM106BQ9NUM4 274 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 SCN8AQ9UQD0 1980 aa0.96□□□□□ -2.26
XRN1-214ENST00000498077 LAMA2P24043 3122 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 A0A1W2PPV4 95 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 F6UZH7 168 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 IGLV1-47P01700 117 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 RPL27AP46776 148 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 CYCSP99999 105 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 TMEM215Q68D42 235 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 MRPL54Q6P161 138 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 NAT14Q8WUY8 206 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TMEM239Q8WW34 195 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 C9orf85Q96MD7 179 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 SNHG12Q9BXW3 62 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TMEM14AQ9Y6G1 99 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TP53BP1Q12888 1972 aaPredicted RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 TRBV20-1A0A075B6N2 111 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TMEM250H0YL14 139 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 J3KT08 172 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 ATP6V0E1O15342 81 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 GNG7O60262 68 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 CRISP2P16562 243 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 RPL37AP61513 92 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms