RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 SRIP30626 198 aa13.9□□□□□ -0.18
LMO4-204ENST00000495705 CACNG7P62955 275 aa13.9□□□□□ -0.18
LMO4-204ENST00000495705 CT83Q5H943 113 aa13.9□□□□□ -0.18
LMO4-204ENST00000495705 FAM74A4Q5TZK3 123 aa13.9□□□□□ -0.18
LMO4-204ENST00000495705 SAMD10Q9BYL1 202 aa13.9□□□□□ -0.18
LMO4-204ENST00000495705 HYDINQ4G0P3 5121 aa13.89□□□□□ -0.19
LMO4-204ENST00000495705 MUC21A0A0G2JKD1 596 aa13.89□□□□□ -0.19
LMO4-204ENST00000495705 MUC21A0A140T8X8 626 aa13.89□□□□□ -0.19
LMO4-204ENST00000495705 AP1S3Q96PC3 154 aa13.89□□□□□ -0.19
LMO4-204ENST00000495705 OSTCQ9NRP0 149 aa13.89□□□□□ -0.19
LMO4-204ENST00000495705 A0A087WWL8 130 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 A8MWL6 223 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 CRYGDP07320 174 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 CTRLP40313 264 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 RPL23P62829 140 aaKnown RBP13.88□□□□□ -0.19
LMO4-204ENST00000495705 NEGR1Q7Z3B1 354 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 SH2D6Q7Z4S9 175 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 C15orf54Q8N8G6 183 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 ISOC2Q96AB3 205 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 LINC00588Q9Y4M8 146 aa13.88□□□□□ -0.19
LMO4-204ENST00000495705 ADIRFQ15847 76 aa13.87□□□□□ -0.19
LMO4-204ENST00000495705 ESRGQ1W209 222 aa13.87□□□□□ -0.19
LMO4-204ENST00000495705 WDR73Q6P4I2 378 aa13.87□□□□□ -0.19
LMO4-204ENST00000495705 LYZL1Q6UWQ5 148 aa13.87□□□□□ -0.19
LMO4-204ENST00000495705 SSTP61278 116 aa13.86□□□□□ -0.19
LMO4-204ENST00000495705 CNFNQ9BYD5 112 aa13.86□□□□□ -0.19
LMO4-204ENST00000495705 MRPS16Q9Y3D3 137 aaKnown RBP13.86□□□□□ -0.19
LMO4-204ENST00000495705 LOC100131303A0A0U1RQF7 123 aa13.85□□□□□ -0.19
LMO4-204ENST00000495705 SMIM17P0DL12 118 aa13.85□□□□□ -0.19
LMO4-204ENST00000495705 Q6ZSN1 163 aa13.85□□□□□ -0.19
LMO4-204ENST00000495705 UPK3BQ9BT76 320 aa13.85□□□□□ -0.19
LMO4-204ENST00000495705 KMT2AQ03164 3969 aa13.84□□□□□ -0.19
LMO4-204ENST00000495705 TRGC1P0CF51 173 aa13.84□□□□□ -0.19
LMO4-204ENST00000495705 ZNRF2Q8NHG8 242 aa13.84□□□□□ -0.19
LMO4-204ENST00000495705 GFRA4Q9GZZ7 299 aa13.84□□□□□ -0.19
LMO4-204ENST00000495705 DNAH6Q9C0G6 4158 aa13.83□□□□□ -0.19
LMO4-204ENST00000495705 FAM231BA6NCW3 169 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 RAB4BP61018 213 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 ZNF56Q15929 161 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 UQCC3Q6UW78 93 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 LYPD5Q6UWN5 251 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 C14orf178Q8N769 122 aaPredicted RBP13.83□□□□□ -0.2
LMO4-204ENST00000495705 TSKUQ8WUA8 353 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 GTSF1Q8WW33 167 aa13.83□□□□□ -0.2
LMO4-204ENST00000495705 NTF3P20783 257 aa13.82□□□□□ -0.2
LMO4-204ENST00000495705 FOXA3P55318 350 aaPredicted RBP13.82□□□□□ -0.2
LMO4-204ENST00000495705 OR10G8Q8NGN5 311 aa13.82□□□□□ -0.2
LMO4-204ENST00000495705 V9GYV3 84 aa13.82□□□□□ -0.2
LMO4-204ENST00000495705 TRBV10-1A0A0K0K1A3 114 aa13.81□□□□□ -0.2
LMO4-204ENST00000495705 MSRB1Q9NZV6 116 aa13.81□□□□□ -0.2
LMO4-204ENST00000495705 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
LMO4-204ENST00000495705 TIRAPP58753 221 aa13.8□□□□□ -0.2
LMO4-204ENST00000495705 TWIST1Q15672 202 aa13.8□□□□□ -0.2
LMO4-204ENST00000495705 BORCS7Q96B45 105 aa13.8□□□□□ -0.2
LMO4-204ENST00000495705 IGLV2-18A0A075B6J9 118 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 GAGE12JA6NER3 117 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 HIGD1CA8MV81 97 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 F5H697 171 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
LMO4-204ENST00000495705 GAGE1Q13065 139 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 GAGE4Q13068 117 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 GAGE5Q13069 117 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 GAGE13Q4V321 117 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 ATP6V0E2Q8NHE4 81 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 PGLYRP4Q96LB8 373 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 DPH3P1Q9H4G8 78 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 Q9H8V8 135 aa13.79□□□□□ -0.2
LMO4-204ENST00000495705 EVI2AP22794 236 aa13.78□□□□□ -0.2
LMO4-204ENST00000495705 RPL36AP83881 106 aaKnown RBP13.78□□□□□ -0.2
LMO4-204ENST00000495705 RPL36ALQ969Q0 106 aaKnown RBP13.78□□□□□ -0.2
LMO4-204ENST00000495705 MGPP08493 103 aa13.77□□□□□ -0.21
LMO4-204ENST00000495705 LINC00315P59091 139 aa13.77□□□□□ -0.21
LMO4-204ENST00000495705 SMIM15Q7Z3B0 74 aa13.77□□□□□ -0.21
LMO4-204ENST00000495705 COMMD7Q86VX2 200 aa13.76□□□□□ -0.21
LMO4-204ENST00000495705 GTSF1LQ9H1H1 148 aa13.76□□□□□ -0.21
LMO4-204ENST00000495705 TRBV7-3A0A075B6L6 115 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 NBDYA0A0U1RRE5 68 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 A0A1B0GUT8 65 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 LINC00862A6NCI5 91 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 H7C1H1 209 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 M0R2N4 97 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 SIVA1O15304 175 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 Q6ZR54 194 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 Q9UF83 564 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 NAT8BQ9UHF3 227 aa13.75□□□□□ -0.21
LMO4-204ENST00000495705 TMEM218A2RU14 115 aa13.74□□□□□ -0.21
LMO4-204ENST00000495705 PPP1R2P9O14990 202 aa13.74□□□□□ -0.21
LMO4-204ENST00000495705 SMIM27A0A1W2PRY6 76 aa13.73□□□□□ -0.21
LMO4-204ENST00000495705 NEXN-AS1Q8NBZ9 246 aa13.73□□□□□ -0.21
LMO4-204ENST00000495705 NUP35Q8NFH5 326 aa13.73□□□□□ -0.21
LMO4-204ENST00000495705 UBE2D3P61077 147 aa13.72□□□□□ -0.21
LMO4-204ENST00000495705 UBE2D2P62837 147 aa13.72□□□□□ -0.21
LMO4-204ENST00000495705 RIGQ13278 110 aa13.72□□□□□ -0.21
LMO4-204ENST00000495705 LELP1Q5T871 98 aa13.72□□□□□ -0.21
LMO4-204ENST00000495705 SUMO4Q6EEV6 95 aa13.72□□□□□ -0.21
LMO4-204ENST00000495705 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.72□□□□□ -0.21
LMO4-204ENST00000495705 A0A087WWC5 75 aa13.71□□□□□ -0.21
LMO4-204ENST00000495705 TRAV8-6A0A0B4J262 113 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms