RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 Q6ZTI0 123 aa12.59□□□□□ -0.39
PSMB4-206ENST00000495288 ALKBH7Q9BT30 221 aaPredicted RBP12.59□□□□□ -0.39
PSMB4-206ENST00000495288 RETNQ9HD89 108 aa12.59□□□□□ -0.39
PSMB4-206ENST00000495288 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 IGHV4-28A0A0C4DH34 117 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 GAGE12BA1L429 117 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 A8MWV9 139 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 D6R8Y8 96 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 DEFB4AO15263 64 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 GAGE7O76087 117 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 NCR2O95944 276 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 GAGE12FP0CL80 117 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 GAGE12GP0CL81 117 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 GAGE12IP0CL82 117 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 RASL10AQ92737 203 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
PSMB4-206ENST00000495288 S100A6P06703 90 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 CRYGDP07320 174 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 MIFP14174 115 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 LGALS9BQ3B8N2 356 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 ORMDL3Q8N138 153 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 PRELID3AQ96N28 172 aa12.57□□□□□ -0.4
PSMB4-206ENST00000495288 TRAV26-2A0A0B4J265 109 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 RS1O15537 224 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 ZNF56Q15929 161 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 TP53TG1Q9Y2A0 90 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 U3KQK5 164 aa12.56□□□□□ -0.4
PSMB4-206ENST00000495288 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
PSMB4-206ENST00000495288 PPBPP02775 128 aa12.55□□□□□ -0.4
PSMB4-206ENST00000495288 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
PSMB4-206ENST00000495288 LINC00315P59091 139 aa12.55□□□□□ -0.4
PSMB4-206ENST00000495288 IQCJQ1A5X6 159 aa12.55□□□□□ -0.4
PSMB4-206ENST00000495288 MRAP2Q96G30 205 aa12.55□□□□□ -0.4
PSMB4-206ENST00000495288 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
PSMB4-206ENST00000495288 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
PSMB4-206ENST00000495288 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
PSMB4-206ENST00000495288 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
PSMB4-206ENST00000495288 SUMO4Q6EEV6 95 aa12.53□□□□□ -0.4
PSMB4-206ENST00000495288 Q8NAQ8 132 aa12.53□□□□□ -0.4
PSMB4-206ENST00000495288 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
PSMB4-206ENST00000495288 LOC389332A0A1B0GUA5 103 aa12.52□□□□□ -0.41
PSMB4-206ENST00000495288 NPYP01303 97 aa12.52□□□□□ -0.41
PSMB4-206ENST00000495288 Q0VG73 95 aa12.52□□□□□ -0.41
PSMB4-206ENST00000495288 FAM222AQ5U5X8 452 aa12.52□□□□□ -0.41
PSMB4-206ENST00000495288 POM121L12Q8N7R1 296 aa12.52□□□□□ -0.41
PSMB4-206ENST00000495288 C18orf32Q8TCD1 76 aa12.52□□□□□ -0.41
PSMB4-206ENST00000495288 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
PSMB4-206ENST00000495288 RHODO00212 210 aa12.51□□□□□ -0.41
PSMB4-206ENST00000495288 TNFRSF6BO95407 300 aa12.51□□□□□ -0.41
PSMB4-206ENST00000495288 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
PSMB4-206ENST00000495288 OR10J3Q5JRS4 329 aa12.51□□□□□ -0.41
PSMB4-206ENST00000495288 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
PSMB4-206ENST00000495288 MGAM2Q2M2H8 2515 aa12.5□□□□□ -0.41
PSMB4-206ENST00000495288 NOTCH1P46531 2555 aa12.5□□□□□ -0.41
PSMB4-206ENST00000495288 LYRM9A8MSI8 78 aa12.5□□□□□ -0.41
PSMB4-206ENST00000495288 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
PSMB4-206ENST00000495288 Q6ZSN1 163 aa12.5□□□□□ -0.41
PSMB4-206ENST00000495288 NIT1Q86X76 327 aa12.5□□□□□ -0.41
PSMB4-206ENST00000495288 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
PSMB4-206ENST00000495288 ZFP2Q6ZN57 461 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 NRACQ8N912 160 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 PRSS3P2Q8NHM4 247 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 MAP1LC3AQ9H492 121 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 LAMTOR2Q9Y2Q5 125 aa12.49□□□□□ -0.41
PSMB4-206ENST00000495288 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
PSMB4-206ENST00000495288 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 DNAH3Q8TD57 4116 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 H7C1H1 209 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 M0QY20 66 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 SERF1AO75920 110 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 PPP1R17O96001 155 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 DAD1P61803 113 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
PSMB4-206ENST00000495288 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
PSMB4-206ENST00000495288 C5orf52A6NGY3 159 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 NUPR1O60356 82 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 IFI27P40305 119 aaPredicted RBP12.46□□□□□ -0.41
PSMB4-206ENST00000495288 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 COA6Q5JTJ3 125 aaKnown RBP12.46□□□□□ -0.41
PSMB4-206ENST00000495288 FA2HQ7L5A8 372 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 TM2D3Q9BRN9 247 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 ST20Q9HBF5 79 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
PSMB4-206ENST00000495288 CIDEAO60543 219 aa12.45□□□□□ -0.42
PSMB4-206ENST00000495288 P0DMU3 169 aa12.45□□□□□ -0.42
PSMB4-206ENST00000495288 FAM231AP0DMU4 169 aa12.45□□□□□ -0.42
PSMB4-206ENST00000495288 FAM231CP0DMU5 169 aa12.45□□□□□ -0.42
PSMB4-206ENST00000495288 HOXA5P20719 270 aa12.45□□□□□ -0.42
PSMB4-206ENST00000495288 ZMAT4Q9H898 229 aa12.45□□□□□ -0.42
PSMB4-206ENST00000495288 NIT2Q9NQR4 276 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms