RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OVOL1O14753 267 aa10.4□□□□□ -0.74
VCP-207ENST00000493886 OR10J6PQ8NGY7 276 aa10.4□□□□□ -0.74
VCP-207ENST00000493886 LINC00477Q96M19 166 aa10.4□□□□□ -0.74
VCP-207ENST00000493886 DOPEY2Q9Y3R5 2298 aa10.4□□□□□ -0.74
VCP-207ENST00000493886 HOXA3O43365 443 aaPredicted RBP10.4□□□□□ -0.75
VCP-207ENST00000493886 DEFB1P60022 68 aa10.4□□□□□ -0.75
VCP-207ENST00000493886 KRTAP1-3Q8IUG1 177 aa10.4□□□□□ -0.75
VCP-207ENST00000493886 TM2D2Q9BX73 214 aa10.4□□□□□ -0.75
VCP-207ENST00000493886 CREBBPQ92793 2442 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 F5H768 121 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 PRSS1P07477 247 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 PRR9Q5T870 116 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 IGKV2D-26A0A0A0MRZ7 120 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 LOC107984640A0A0U1RRK4 108 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 XGP55808 180 aa10.39□□□□□ -0.75
VCP-207ENST00000493886 K7EMI3 77 aa10.38□□□□□ -0.75
VCP-207ENST00000493886 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
VCP-207ENST00000493886 AGRNO00468 2067 aa10.38□□□□□ -0.75
VCP-207ENST00000493886 A0A1W2PPM0 123 aa10.38□□□□□ -0.75
VCP-207ENST00000493886 TMEM158Q8WZ71 300 aa10.38□□□□□ -0.75
VCP-207ENST00000493886 SRD5A1P18405 259 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 ZFAND2AQ8N6M9 145 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 FOXC2Q99958 501 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 SORL1Q92673 2214 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 F6UB75 175 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 H3BRM9 83 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 ELANEP08246 267 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 FABP2P12104 132 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 GTSCR1Q86UQ5 136 aa10.37□□□□□ -0.75
VCP-207ENST00000493886 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
VCP-207ENST00000493886 Q6ZUT4 128 aa10.36□□□□□ -0.75
VCP-207ENST00000493886 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
VCP-207ENST00000493886 H3BVH4 76 aa10.36□□□□□ -0.75
VCP-207ENST00000493886 SEC11AP67812 179 aa10.36□□□□□ -0.75
VCP-207ENST00000493886 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
VCP-207ENST00000493886 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
VCP-207ENST00000493886 GCSHP23434 173 aa10.35□□□□□ -0.75
VCP-207ENST00000493886 FAM19A4Q96LR4 140 aa10.35□□□□□ -0.75
VCP-207ENST00000493886 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 DCANP1Q8TF63 244 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 APCP25054 2843 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 A6NDN8 102 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 FCER1GP30273 86 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 TEX15Q9BXT5 2789 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 K7ERJ3 54 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
VCP-207ENST00000493886 IGHV4OR15-8A0A075B7B6 117 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 A0A087WW49 117 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 ZC2HC1BQ5TFG8 222 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 DEFB104AQ8WTQ1 72 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 MXRA5Q9NR99 2828 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 WFDC11Q8NEX6 87 aa10.33□□□□□ -0.76
VCP-207ENST00000493886 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
VCP-207ENST00000493886 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 M0R381 172 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 RNASE4P34096 147 aaKnown RBP10.32□□□□□ -0.76
VCP-207ENST00000493886 FXYD2P54710 66 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 IGKCP01834 107 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 HHLA3Q9XRX5 114 aa10.32□□□□□ -0.76
VCP-207ENST00000493886 LGALS9O00182 355 aa10.31□□□□□ -0.76
VCP-207ENST00000493886 MEIG1Q5JSS6 88 aa10.31□□□□□ -0.76
VCP-207ENST00000493886 SAMD5Q5TGI4 173 aa10.31□□□□□ -0.76
VCP-207ENST00000493886 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
VCP-207ENST00000493886 Q8N2B8 174 aa10.31□□□□□ -0.76
VCP-207ENST00000493886 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
VCP-207ENST00000493886 MRPL35Q9NZE8 188 aaKnown RBP10.31□□□□□ -0.76
VCP-207ENST00000493886 HOXD3P31249 432 aaPredicted RBP10.31□□□□□ -0.76
VCP-207ENST00000493886 SEC61GP60059 68 aa10.3□□□□□ -0.76
VCP-207ENST00000493886 FHL3Q13643 280 aa10.3□□□□□ -0.76
VCP-207ENST00000493886 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
VCP-207ENST00000493886 Q8N8P6 123 aa10.3□□□□□ -0.76
VCP-207ENST00000493886 NRACQ8N912 160 aa10.3□□□□□ -0.76
VCP-207ENST00000493886 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
VCP-207ENST00000493886 IGLV2-18A0A075B6J9 118 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 LINC00694P0DN24 101 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
VCP-207ENST00000493886 ASIPP42127 132 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 CUBNO60494 3623 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 KLLNB2CW77 178 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 DPM2O94777 84 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 PSMG4Q5JS54 123 aa10.29□□□□□ -0.76
VCP-207ENST00000493886 K7EQG2 157 aa10.28□□□□□ -0.76
VCP-207ENST00000493886 PLA2G2AP14555 144 aa10.28□□□□□ -0.76
VCP-207ENST00000493886 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
VCP-207ENST00000493886 TLN2Q9Y4G6 2542 aa10.28□□□□□ -0.76
VCP-207ENST00000493886 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
VCP-207ENST00000493886 SNRPD3P62318 126 aaKnown RBP10.28□□□□□ -0.76
VCP-207ENST00000493886 LAGE3Q14657 143 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms