RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 Q6ZSN1 163 aa9.67□□□□□ -0.86
CCM2-217ENST00000492883 FAM231DQ6ZW35 169 aa9.67□□□□□ -0.86
CCM2-217ENST00000492883 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
CCM2-217ENST00000492883 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
CCM2-217ENST00000492883 M0R2N4 97 aa9.66□□□□□ -0.86
CCM2-217ENST00000492883 UFSP1Q6NVU6 142 aa9.66□□□□□ -0.86
CCM2-217ENST00000492883 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
CCM2-217ENST00000492883 LYZL1Q6UWQ5 148 aa9.66□□□□□ -0.86
CCM2-217ENST00000492883 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
CCM2-217ENST00000492883 C14orf178Q8N769 122 aaPredicted RBP9.66□□□□□ -0.86
CCM2-217ENST00000492883 NAT8Q9UHE5 227 aa9.66□□□□□ -0.86
CCM2-217ENST00000492883 A8MWL6 223 aa9.65□□□□□ -0.86
CCM2-217ENST00000492883 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
CCM2-217ENST00000492883 ADIRFQ15847 76 aa9.65□□□□□ -0.86
CCM2-217ENST00000492883 C15orf54Q8N8G6 183 aa9.65□□□□□ -0.86
CCM2-217ENST00000492883 ZNRF2Q8NHG8 242 aa9.65□□□□□ -0.86
CCM2-217ENST00000492883 Q9H8V8 135 aa9.65□□□□□ -0.86
CCM2-217ENST00000492883 MRPS16Q9Y3D3 137 aaKnown RBP9.65□□□□□ -0.86
CCM2-217ENST00000492883 NTF3P20783 257 aa9.64□□□□□ -0.87
CCM2-217ENST00000492883 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
CCM2-217ENST00000492883 AP1S3Q96PC3 154 aa9.64□□□□□ -0.87
CCM2-217ENST00000492883 OSTCQ9NRP0 149 aa9.64□□□□□ -0.87
CCM2-217ENST00000492883 GAGE12JA6NER3 117 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 F5H697 171 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 RAB4BP61018 213 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 GAGE1Q13065 139 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 GAGE4Q13068 117 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 GAGE5Q13069 117 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 ZNF56Q15929 161 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 GAGE13Q4V321 117 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 CT83Q5H943 113 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 WDR73Q6P4I2 378 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
CCM2-217ENST00000492883 TRGC1P0CF51 173 aa9.62□□□□□ -0.87
CCM2-217ENST00000492883 CTRLP40313 264 aa9.62□□□□□ -0.87
CCM2-217ENST00000492883 TWIST1Q15672 202 aa9.62□□□□□ -0.87
CCM2-217ENST00000492883 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
CCM2-217ENST00000492883 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
CCM2-217ENST00000492883 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
CCM2-217ENST00000492883 MUC4Q99102 2169 aa9.61□□□□□ -0.87
CCM2-217ENST00000492883 OR10G8Q8NGN5 311 aa9.61□□□□□ -0.87
CCM2-217ENST00000492883 TSKUQ8WUA8 353 aa9.61□□□□□ -0.87
CCM2-217ENST00000492883 BORCS7Q96B45 105 aa9.61□□□□□ -0.87
CCM2-217ENST00000492883 Q9UF83 564 aa9.61□□□□□ -0.87
CCM2-217ENST00000492883 MGPP08493 103 aa9.6□□□□□ -0.87
CCM2-217ENST00000492883 EVI2AP22794 236 aa9.6□□□□□ -0.87
CCM2-217ENST00000492883 KIF25-AS1Q9Y6Z4 181 aa9.6□□□□□ -0.87
CCM2-217ENST00000492883 V9GYV3 84 aa9.6□□□□□ -0.87
CCM2-217ENST00000492883 SACSQ9NZJ4 4579 aa9.6□□□□□ -0.87
CCM2-217ENST00000492883 TRBV10-1A0A0K0K1A3 114 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 SIVA1O15304 175 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 FOXA3P55318 350 aaPredicted RBP9.59□□□□□ -0.87
CCM2-217ENST00000492883 TIRAPP58753 221 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 RPL36AP83881 106 aaKnown RBP9.59□□□□□ -0.87
CCM2-217ENST00000492883 Q6ZR54 194 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 SMIM15Q7Z3B0 74 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 RPL36ALQ969Q0 106 aaKnown RBP9.59□□□□□ -0.87
CCM2-217ENST00000492883 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 GTSF1LQ9H1H1 148 aa9.59□□□□□ -0.87
CCM2-217ENST00000492883 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
CCM2-217ENST00000492883 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
CCM2-217ENST00000492883 LINC00315P59091 139 aa9.58□□□□□ -0.88
CCM2-217ENST00000492883 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
CCM2-217ENST00000492883 TRBV7-3A0A075B6L6 115 aa9.57□□□□□ -0.88
CCM2-217ENST00000492883 TRAV8-6A0A0B4J262 113 aa9.57□□□□□ -0.88
CCM2-217ENST00000492883 TTC32Q5I0X7 151 aa9.57□□□□□ -0.88
CCM2-217ENST00000492883 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
CCM2-217ENST00000492883 UQCC3Q6UW78 93 aa9.57□□□□□ -0.88
CCM2-217ENST00000492883 LYSTQ99698 3801 aa9.57□□□□□ -0.88
CCM2-217ENST00000492883 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 A0A1B0GUT8 65 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 H7C1H1 209 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 LELP1Q5T871 98 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 WFDC10BQ8IUB3 73 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 NAT8BQ9UHF3 227 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 RYR2Q92736 4967 aa9.56□□□□□ -0.88
CCM2-217ENST00000492883 TRAV9-2A0A087WT02 112 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 UBE2D3P61077 147 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 UBE2D2P62837 147 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
CCM2-217ENST00000492883 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.55□□□□□ -0.88
CCM2-217ENST00000492883 NUP35Q8NFH5 326 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 TNFRSF18Q9Y5U5 241 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 RYR3Q15413 4870 aa9.55□□□□□ -0.88
CCM2-217ENST00000492883 A0A087WWC5 75 aa9.54□□□□□ -0.88
CCM2-217ENST00000492883 M0QY20 66 aa9.54□□□□□ -0.88
CCM2-217ENST00000492883 RIGQ13278 110 aa9.54□□□□□ -0.88
CCM2-217ENST00000492883 HYDINQ4G0P3 5121 aa9.54□□□□□ -0.88
CCM2-217ENST00000492883 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 SMIM27A0A1W2PRY6 76 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms