RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ZNF738Q8NE65 137 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 Q8WTZ3 238 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 ACOT13Q9NPJ3 140 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 PRELID3BQ9Y3B1 194 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 IGLV4-60A0A075B6I1 120 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 IGKV2-28A0A075B6P5 120 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 K7EPK0 472 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 IGKV2D-28P01615 120 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 ANGP03950 147 aaKnown RBP1.76□□□□□ -2.13
UBR4-215ENST00000492606 IGLC1P0CG04 106 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 GNG11P61952 73 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 MEF2BQ02080 365 aaPredicted RBP1.76□□□□□ -2.13
UBR4-215ENST00000492606 CDNFQ49AH0 187 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 SPAG11AQ6PDA7 123 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 ST20-AS1Q8NBB2 130 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 OR5D14Q8NGL3 314 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 OR4X1Q8NH49 305 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 UQCC1Q9NVA1 299 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 CCDC167Q9P0B6 97 aa1.76□□□□□ -2.13
UBR4-215ENST00000492606 A0A087WWC5 75 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 IGKV2D-26A0A0A0MRZ7 120 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 A0A1B0GXF2 115 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 RAB19A4D1S5 217 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 METTL15A6NJ78 407 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 MYL12BO14950 172 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 UBDO15205 165 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 APOA1P02647 267 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 YPEL3P61236 119 aaPredicted RBP1.75□□□□□ -2.13
UBR4-215ENST00000492606 SUPT4H1P63272 117 aaKnown RBP1.75□□□□□ -2.13
UBR4-215ENST00000492606 STX3Q13277 289 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 RHOHQ15669 191 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 COX19Q49B96 90 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 IFT20Q8IY31 132 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 ORMDL3Q8N138 153 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 OR1S1Q8NH92 325 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 DEDD2Q8WXF8 326 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 S100A13Q99584 98 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 PRADC1Q9BSG0 188 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 TMEM138Q9NPI0 162 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 C12orf4Q9NQ89 552 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 TAS2R4Q9NYW5 299 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 ANXA10Q9UJ72 324 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 RBM7Q9Y580 266 aaKnown RBP1.75□□□□□ -2.13
UBR4-215ENST00000492606 ORC6Q9Y5N6 252 aa1.75□□□□□ -2.13
UBR4-215ENST00000492606 TRBV6-7A0A0A0MS04 114 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 IGHV3-73A0A0B4J1V6 119 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 TRBV6-4A0A1B0GX49 114 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 FXYD1O00168 92 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 GADD45GO95257 159 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 NPPAP01160 153 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 SHBGP04278 402 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 PRSS3P35030 304 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 ZNF93P35789 620 aaPredicted RBP1.74□□□□□ -2.13
UBR4-215ENST00000492606 RAB5CP51148 216 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 UBE2D3P61077 147 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 OR8I2Q8N0Y5 310 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 LINC00526Q96FQ7 95 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 MRPL48Q96GC5 212 aaKnown RBP1.74□□□□□ -2.13
UBR4-215ENST00000492606 MARVELD1Q9BSK0 173 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 MIXL1Q9H2W2 232 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 VCX3AQ9NNX9 186 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 CYTL1Q9NRR1 136 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 RBM12B-AS1Q9P1G2 102 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 AK3Q9UIJ7 227 aa1.74□□□□□ -2.13
UBR4-215ENST00000492606 UTP11Q9Y3A2 253 aaKnown RBP1.74□□□□□ -2.13
UBR4-215ENST00000492606 C7orf66A4D0T2 115 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 TMEM262E9PQX1 116 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 ZNF670-ZNF695F2Z2N8 137 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 ORM2P19652 201 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 IFNGR2P38484 337 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 SERPINB10P48595 397 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
UBR4-215ENST00000492606 RBM3P98179 157 aaKnown RBP1.73□□□□□ -2.13
UBR4-215ENST00000492606 ZNF90Q03938 601 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 PMVKQ15126 192 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 C1orf194Q5T5A4 169 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 GLIPR1L1Q6UWM5 242 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 H1FOOQ8IZA3 346 aaPredicted RBP1.73□□□□□ -2.13
UBR4-215ENST00000492606 LINC00269Q8N2A0 174 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 MIR7-3HGQ8N6C7 128 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 SMIM8Q96KF7 97 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 CIB1Q99828 191 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 PBDC1Q9BVG4 233 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 SH3BGRL3Q9H299 93 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 TREM1Q9NP99 234 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 TAS2R8Q9NYW2 309 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 NDUFA12Q9UI09 145 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 PRO0628Q9UI54 55 aa1.73□□□□□ -2.13
UBR4-215ENST00000492606 FAM32AQ9Y421 112 aaKnown RBP1.73□□□□□ -2.13
UBR4-215ENST00000492606 TRAV30A0A087WSZ9 112 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 DUXBA0A1W2PPF3 345 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 C7orf71A4D174 169 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 HSBP1L1C9JCN9 74 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 OR7C2O60412 319 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 CRTAPO75718 401 aaPredicted RBP1.72□□□□□ -2.13
UBR4-215ENST00000492606 ATP5HO75947 161 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms