RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 APODP05090 189 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 CYP2G1PQ6ZSU1 146 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 FAT4Q6V0I7 4981 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 PIEZO1Q92508 2521 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 PTPRMP28827 1452 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 KCPQ6ZWJ8 1503 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 RREB1Q92766 1687 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 APOC4-APOC2K7ER74 178 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 M0R129 80 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 COX4I1P13073 169 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 NPC2P61916 151 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 SMIM21Q3B7S5 101 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 MIC13Q5XKP0 118 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 ANP32BQ92688 251 aaKnown RBP0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 PSMG3Q9BT73 122 aaPredicted RBP0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 NDUFA12Q9UI09 145 aa0.28□□□□□ -2.36
HMGB1P30-201ENST00000492455 PRG4Q92954 1404 aaPredicted RBP0.28□□□□□ -2.37
HMGB1P30-201ENST00000492455 F5P12259 2224 aa0.28□□□□□ -2.37
HMGB1P30-201ENST00000492455 BCORL1Q5H9F3 1711 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 CDK5RAP2Q96SN8 1893 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 A0A087WTM6 91 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 K7ERU9 68 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 NPFFO15130 113 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 CFDP00746 253 aaPredicted RBP0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 CCL3L1P16619 93 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 VMO1Q7Z5L0 202 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 TSTD1Q8NFU3 115 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 VSTM2AQ8TAG5 236 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 BPESC1Q9GZL8 116 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 COPZ2Q9P299 210 aa0.27□□□□□ -2.37
HMGB1P30-201ENST00000492455 TTC28Q96AY4 2481 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 TRAV12-3A0A0B4J271 114 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 FAM92AA1XBS5 289 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 IFNA17P01571 189 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 PIRTP0C851 137 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 PIPP12273 146 aaPredicted RBP0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 GCHFRP30047 84 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 SSBP1Q04837 148 aaKnown RBP0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 SPCS2Q15005 226 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 SLC48A1Q6P1K1 146 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 RPRMQ9NS64 109 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 TMEM242Q9NWH2 141 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 V9GYV3 84 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 PLXNA2O75051 1894 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 CADP27708 2225 aa0.26□□□□□ -2.37
HMGB1P30-201ENST00000492455 ANK2Q01484 3957 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 F8P00451 2351 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 TANC1Q9C0D5 1861 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 A0A0D9SFI3 127 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 SNCGO76070 127 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 SMCO1Q147U7 214 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 Q5BKY6 102 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 SPANXN1Q5VSR9 72 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 C4orf33Q8N1A6 199 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 C20orf197Q8N268 126 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 COX7B2Q8TF08 81 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 COPS9Q8WXC6 57 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 MAST4O15021 2626 aa0.25□□□□□ -2.37
HMGB1P30-201ENST00000492455 FHAD1B1AJZ9 1412 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 TRBV7-1A0A0A6YYK4 115 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 C10orf142B7Z368 130 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 ACYP2P14621 99 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 RPS25P62851 125 aaKnown RBP0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 C9orf116Q5BN46 136 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 Q6ZUT4 128 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 UBE2DNLQ8IWF7 75 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 SMIM11BQ8TCY0 68 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 TCEAL4Q96EI5 215 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 NPVFQ9HCQ7 196 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 ZFYVE26Q68DK2 2539 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 RBBP6Q7Z6E9 1792 aaKnown RBP0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 CEP152O94986 1710 aa0.24□□□□□ -2.37
HMGB1P30-201ENST00000492455 MYH13Q9UKX3 1938 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 PTPRZ1P23471 2315 aaPredicted RBP0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 GVQW2A0A096LPI5 108 aaPredicted RBP0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 GUCA1AP43080 201 aaPredicted RBP0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 COPZ1P61923 177 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 RRAS2P62070 204 aaPredicted RBP0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 SCIMPQ6UWF3 145 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 KCNRGQ8N5I3 272 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 Q96NJ1 140 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 AQP10Q96PS8 301 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 SDF2Q99470 211 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 TPT1P8Q9HAU6 139 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 PROK2Q9HC23 129 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 ADGRB1O14514 1584 aa0.23□□□□□ -2.37
HMGB1P30-201ENST00000492455 KIF13AQ9H1H9 1805 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 POLQO75417 2590 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 DOCK11Q5JSL3 2073 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 PIN1P1O15428 100 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 IL5P05113 134 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 UBE2G1P62253 170 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 SPTSSAQ969W0 71 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 PFDN5Q99471 154 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 U3KQA8 63 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 IGF2RP11717 2491 aa0.22□□□□□ -2.37
HMGB1P30-201ENST00000492455 SOGA1O94964 1423 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms