RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 NPC2P61916 151 aa-0.05□□□□□ -2.42
CD46-216ENST00000490278 SMIM11BQ8TCY0 68 aa-0.05□□□□□ -2.42
CD46-216ENST00000490278 AIF1LQ9BQI0 150 aa-0.05□□□□□ -2.42
CD46-216ENST00000490278 MYO7AQ13402 2215 aa-0.05□□□□□ -2.42
CD46-216ENST00000490278 F5P12259 2224 aa-0.06□□□□□ -2.42
CD46-216ENST00000490278 C4orf33Q8N1A6 199 aa-0.06□□□□□ -2.42
CD46-216ENST00000490278 KIF13AQ9H1H9 1805 aa-0.06□□□□□ -2.42
CD46-216ENST00000490278 F8P00451 2351 aa-0.06□□□□□ -2.42
CD46-216ENST00000490278 ERCC6Q03468 1493 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 TRBV20-1A0A075B6N2 111 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 APODP05090 189 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 SCGB1A1P11684 91 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 NCS1P62166 190 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 FAM74A4Q5TZK3 123 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 C20orf197Q8N268 126 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 MMGT1Q8N4V1 131 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 FAM213BQ8TBF2 198 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 TMEM242Q9NWH2 141 aa-0.07□□□□□ -2.42
CD46-216ENST00000490278 HMCN2Q8NDA2 5059 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 AHCTF1Q8WYP5 2266 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 TRAV12-3A0A0B4J271 114 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 NMBP08949 121 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 SPCS2Q15005 226 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 SLC48A1Q6P1K1 146 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 COX7B2Q8TF08 81 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 SYNJ1O43426 1573 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 WNK2Q9Y3S1 2297 aa-0.08□□□□□ -2.42
CD46-216ENST00000490278 TRBV7-1A0A0A6YYK4 115 aa-0.09□□□□□ -2.42
CD46-216ENST00000490278 PYDC1Q8WXC3 89 aa-0.09□□□□□ -2.42
CD46-216ENST00000490278 V9GYV3 84 aa-0.09□□□□□ -2.42
CD46-216ENST00000490278 ANKRD30AQ9BXX3 1397 aa-0.09□□□□□ -2.42
CD46-216ENST00000490278 POLQO75417 2590 aa-0.09□□□□□ -2.42
CD46-216ENST00000490278 SSC5DA1L4H1 1573 aa-0.1□□□□□ -2.42
CD46-216ENST00000490278 CACNA1CQ13936 2221 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 FAM208BQ5VWN6 2430 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 DR1Q01658 176 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 LINC01545Q5VT33 79 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 Q96NJ1 140 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 SAR1AQ9NR31 198 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 NDUFA12Q9UI09 145 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 UNC79Q9P2D8 2635 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 ASXL3Q9C0F0 2248 aa-0.1□□□□□ -2.43
CD46-216ENST00000490278 HIVEP3Q5T1R4 2406 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 OVOS2A0A0J9YW53 1432 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 OVOS2Q6IE36 1432 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 PLXNA1Q9UIW2 1896 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 CADP27708 2225 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 AKAP14Q86UN6 197 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 VSTM2AQ8TAG5 236 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 U3KQA8 63 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 FLNCQ14315 2725 aa-0.11□□□□□ -2.43
CD46-216ENST00000490278 NSD1Q96L73 2696 aaPredicted RBP-0.11□□□□□ -2.43
CD46-216ENST00000490278 IGLC6P0CF74 106 aa-0.12□□□□□ -2.43
CD46-216ENST00000490278 ACYP2P14621 99 aa-0.12□□□□□ -2.43
CD46-216ENST00000490278 FAM236AA0A1B0GUQ0 79 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 FAM236BA0A1B0GV22 79 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 IFITM1P13164 125 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 HIST1H1AQ02539 215 aaPredicted RBP-0.13□□□□□ -2.43
CD46-216ENST00000490278 SPANXN1Q5VSR9 72 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 MIC13Q5XKP0 118 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 HSPG2P98160 4391 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 KMT2AQ03164 3969 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 HECTD4Q9Y4D8 3996 aa-0.13□□□□□ -2.43
CD46-216ENST00000490278 ANKRD17O75179 2603 aaKnown RBP-0.14□□□□□ -2.43
CD46-216ENST00000490278 ABCA2Q9BZC7 2435 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 TMEM14DPA8MWL7 114 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 M0R129 80 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 Q6ZRX8 168 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 DISP2A7MBM2 1401 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 CSMD3Q7Z407 3707 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 LRP2P98164 4655 aa-0.14□□□□□ -2.43
CD46-216ENST00000490278 CHD9Q3L8U1 2897 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 PHIPQ8WWQ0 1821 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 NRXN2Q9P2S2 1712 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 PIRTP0C851 137 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 CKS1BP61024 79 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 SCP2D1Q9UJQ7 156 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 CELSR2Q9HCU4 2923 aa-0.15□□□□□ -2.43
CD46-216ENST00000490278 KIAA0100Q14667 2235 aaKnown RBP-0.15□□□□□ -2.43
CD46-216ENST00000490278 NCOR1O75376 2440 aa-0.16□□□□□ -2.43
CD46-216ENST00000490278 STAB1Q9NY15 2570 aa-0.16□□□□□ -2.43
CD46-216ENST00000490278 TRGV1A0A0A0MS02 117 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 GCHFRP30047 84 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 INSL4Q14641 139 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 SMIM3Q9BZL3 60 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 RPRMQ9NS64 109 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 GSKIPQ9P0R6 139 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 PTPRQQ9UMZ3 2332 aa-0.16□□□□□ -2.44
CD46-216ENST00000490278 MUC2Q02817 5179 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 AKAP11Q9UKA4 1901 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 J3QR89 54 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 TSPAN19P0C672 248 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 LINC00694P0DN24 101 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 EDDM3BP56851 147 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 C9orf116Q5BN46 136 aaPredicted RBP-0.17□□□□□ -2.44
CD46-216ENST00000490278 RPL7L1Q6DKI1 246 aaKnown RBP-0.17□□□□□ -2.44
CD46-216ENST00000490278 CTAGE3PQ8IX95 158 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 CDK5RAP2Q96SN8 1893 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 CACNA1AO00555 2505 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 MYH13Q9UKX3 1938 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms