RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	ID1	P41134	155 aa		11.72	□□□□□ -0.53
BRD9-208	ENST00000489816	CYSLTR1	Q9Y271	337 aa		11.72	□□□□□ -0.53
BRD9-208	ENST00000489816	PRSS29P	A6NIE9	313 aa		11.72	□□□□□ -0.53
BRD9-208	ENST00000489816		H3BRM9	83 aa		11.72	□□□□□ -0.53
BRD9-208	ENST00000489816	OCIAD2	Q56VL3	154 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	SUMO4	Q6EEV6	95 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816		Q8N1Y9	231 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	LINC01356	Q8N9X3	169 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	FAM19A4	Q96LR4	140 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	HIST1H4G	Q99525	98 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	SPCS1	Q9Y6A9	102 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	KNCN	A6PVL3	124 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	ZNF56	Q15929	161 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	BAALC	Q8WXS3	180 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816	TP53TG1	Q9Y2A0	90 aa		11.71	□□□□□ -0.53
BRD9-208	ENST00000489816		F8VRH5	84 aa		11.71	□□□□□ -0.54
BRD9-208	ENST00000489816		H3BUA1	57 aa		11.71	□□□□□ -0.54
BRD9-208	ENST00000489816	SMIM13	P0DJ93	91 aa		11.71	□□□□□ -0.54
BRD9-208	ENST00000489816		H7C1H1	209 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	SLURP1	P55000	103 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	ORMDL2	Q53FV1	153 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	ATP6V0B	Q99437	205 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	KLLN	B2CW77	178 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	HOXD3	P31249	432 aa	Predicted RBP	11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	LINC00315	P59091	139 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	SCGB2A2	Q13296	93 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	SAMD5	Q5TGI4	173 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	ITPR2	Q14571	2701 aa		11.7	□□□□□ -0.54
BRD9-208	ENST00000489816	UBR5	O95071	2799 aa	Predicted RBP	11.69	□□□□□ -0.54
BRD9-208	ENST00000489816	SDHAF1	A6NFY7	115 aa		11.69	□□□□□ -0.54
BRD9-208	ENST00000489816	SIVA1	O15304	175 aa		11.69	□□□□□ -0.54
BRD9-208	ENST00000489816	TOMM6	Q96B49	74 aa		11.69	□□□□□ -0.54
BRD9-208	ENST00000489816	OR11H12	B2RN74	326 aa		11.69	□□□□□ -0.54
BRD9-208	ENST00000489816	OR11H1	Q8NG94	326 aa		11.69	□□□□□ -0.54
BRD9-208	ENST00000489816	OR11H2	Q8NH07	326 aa		11.69	□□□□□ -0.54
BRD9-208	ENST00000489816		A0A1W2PPM0	123 aa		11.68	□□□□□ -0.54
BRD9-208	ENST00000489816	SNRPD3	P62318	126 aa	Known RBP	11.68	□□□□□ -0.54
BRD9-208	ENST00000489816	AMTN	Q6UX39	209 aa		11.68	□□□□□ -0.54
BRD9-208	ENST00000489816	NEXN-AS1	Q8NBZ9	246 aa		11.68	□□□□□ -0.54
BRD9-208	ENST00000489816	IGHV3-64	A0A075B6Q5	118 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	FN1	P02751	2386 aa	Known RBP	11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	PROK1	P58294	105 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	PRADC1	Q9BSG0	188 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	KIF25-AS1	Q9Y6Z4	181 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816		P0DMU3	169 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	FAM231A	P0DMU4	169 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	FAM231C	P0DMU5	169 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	COX6B1	P14854	86 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	HIST2H2BC	Q6DN03	193 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	GTF2H5	Q6ZYL4	71 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	CEND1	Q8N111	149 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	C20orf78	Q9BR46	151 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816		A0A0J9YX75	114 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	HLA-DRB4	P13762	266 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	SLC25A16	P16260	332 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	ZNF876P	Q49A33	203 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	TCTEX1D4	Q5JR98	221 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	SCGB1D4	Q6XE38	83 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	HLA-DRB4	X5D2U9	266 aa		11.67	□□□□□ -0.54
BRD9-208	ENST00000489816	PRSS47	A8MTI9	375 aa		11.66	□□□□□ -0.54
BRD9-208	ENST00000489816	PLN	P26678	52 aa		11.66	□□□□□ -0.54
BRD9-208	ENST00000489816		Q9UF83	564 aa		11.66	□□□□□ -0.54
BRD9-208	ENST00000489816	TSHB	P01222	138 aa		11.66	□□□□□ -0.54
BRD9-208	ENST00000489816	FABP2	P12104	132 aa		11.66	□□□□□ -0.54
BRD9-208	ENST00000489816	ZFP2	Q6ZN57	461 aa		11.66	□□□□□ -0.54
BRD9-208	ENST00000489816	RIPPLY3	P57055	190 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	DEFB131A	P59861	70 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	PLEKHB2	Q96CS7	222 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	C11orf86	A6NJI1	115 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816		K7EMT4	169 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816		K7EP34	96 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	CRYGD	P07320	174 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	TMEM170B	Q5T4T1	132 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	AKAP9	Q99996	3911 aa		11.65	□□□□□ -0.54
BRD9-208	ENST00000489816	CDKN1B	P46527	198 aa		11.65	□□□□□ -0.55
BRD9-208	ENST00000489816	UFSP1	Q6NVU6	142 aa		11.65	□□□□□ -0.55
BRD9-208	ENST00000489816	VPREB3	Q9UKI3	123 aa		11.65	□□□□□ -0.55
BRD9-208	ENST00000489816	IGHV3-16	A0A0C4DH30	117 aa		11.64	□□□□□ -0.55
BRD9-208	ENST00000489816	ZNF815P	A8K554	130 aa		11.64	□□□□□ -0.55
BRD9-208	ENST00000489816		K7EQG2	157 aa		11.64	□□□□□ -0.55
BRD9-208	ENST00000489816	RPL24	P83731	157 aa	Known RBP	11.64	□□□□□ -0.55
BRD9-208	ENST00000489816	KIR2DL4	Q99706	377 aa		11.64	□□□□□ -0.55
BRD9-208	ENST00000489816	APRG1	Q8IVJ8	170 aa		11.64	□□□□□ -0.55
BRD9-208	ENST00000489816	RBMY1A1	P0DJD3	496 aa	Known RBP	11.63	□□□□□ -0.55
BRD9-208	ENST00000489816	RBMY1C	P0DJD4	496 aa		11.63	□□□□□ -0.55
BRD9-208	ENST00000489816	RBMY1F	Q15415	496 aa	Known RBP	11.63	□□□□□ -0.55
BRD9-208	ENST00000489816	RNASE13	Q5GAN3	156 aa	Known RBP	11.63	□□□□□ -0.55
BRD9-208	ENST00000489816	ZNF702P	Q9H963	129 aa		11.63	□□□□□ -0.55
BRD9-208	ENST00000489816		A0A096LNT2	108 aa		11.63	□□□□□ -0.55
BRD9-208	ENST00000489816	MYMX	A0A1B0GTQ4	84 aa		11.63	□□□□□ -0.55
BRD9-208	ENST00000489816		A0A1W2PRX2	142 aa		11.63	□□□□□ -0.55
BRD9-208	ENST00000489816	IGHV1OR15-1	A0A075B7D0	117 aa		11.62	□□□□□ -0.55
BRD9-208	ENST00000489816	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
BRD9-208	ENST00000489816	C12orf74	Q32Q52	190 aa		11.62	□□□□□ -0.55
BRD9-208	ENST00000489816	HIVEP2	P31629	2446 aa		11.62	□□□□□ -0.55
BRD9-208	ENST00000489816		H3BMG7	143 aa		11.61	□□□□□ -0.55
BRD9-208	ENST00000489816	LGALS1	P09382	135 aa	Known RBP	11.61	□□□□□ -0.55
BRD9-208	ENST00000489816	IGHV4-31	P0DP07	118 aa		11.61	□□□□□ -0.55
BRD9-208	ENST00000489816	GATA3	P23771	443 aa		11.61	□□□□□ -0.55
BRD9-208	ENST00000489816	POLR2K	P53803	58 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms