RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 A0A087WWL8 130 aa12.07□□□□□ -0.48
ABCF3-217ENST00000489719 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
ABCF3-217ENST00000489719 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
ABCF3-217ENST00000489719 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-217ENST00000489719 IFNA1P01562 189 aa12.06□□□□□ -0.48
ABCF3-217ENST00000489719 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
ABCF3-217ENST00000489719 AKAP14Q86UN6 197 aa12.06□□□□□ -0.48
ABCF3-217ENST00000489719 PGPEP1Q9NXJ5 209 aa12.06□□□□□ -0.48
ABCF3-217ENST00000489719 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
ABCF3-217ENST00000489719 CXCL1P09341 107 aa12.05□□□□□ -0.48
ABCF3-217ENST00000489719 RPL19P84098 196 aaKnown RBP12.05□□□□□ -0.48
ABCF3-217ENST00000489719 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
ABCF3-217ENST00000489719 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
ABCF3-217ENST00000489719 A0A087WWC5 75 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 PDE6DO43924 150 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 Q9UF83 564 aa12.04□□□□□ -0.48
ABCF3-217ENST00000489719 PSCAO43653 123 aa12.03□□□□□ -0.48
ABCF3-217ENST00000489719 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-217ENST00000489719 SPANXN1Q5VSR9 72 aa12.03□□□□□ -0.48
ABCF3-217ENST00000489719 DERL1Q9BUN8 251 aa12.03□□□□□ -0.48
ABCF3-217ENST00000489719 MED9Q9NWA0 146 aa12.03□□□□□ -0.48
ABCF3-217ENST00000489719 A0A087WTM6 91 aa12.02□□□□□ -0.49
ABCF3-217ENST00000489719 CDK2AP2O75956 126 aa12.02□□□□□ -0.49
ABCF3-217ENST00000489719 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
ABCF3-217ENST00000489719 SSBP4Q9BWG4 385 aaPredicted RBP12.02□□□□□ -0.49
ABCF3-217ENST00000489719 VAX2Q9UIW0 290 aa12.02□□□□□ -0.49
ABCF3-217ENST00000489719 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 RAB19A4D1S5 217 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 OR5AL1P0C617 328 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 GNG4P50150 75 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 SSTP61278 116 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
ABCF3-217ENST00000489719 OR10AG1Q8NH19 301 aa12.01□□□□□ -0.49
ABCF3-217ENST00000489719 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
ABCF3-217ENST00000489719 MUC21A0A0G2JKD1 596 aa12□□□□□ -0.49
ABCF3-217ENST00000489719 MUC21A0A140T8X8 626 aa12□□□□□ -0.49
ABCF3-217ENST00000489719 SNAI2O43623 268 aa12□□□□□ -0.49
ABCF3-217ENST00000489719 BCL2P10415 239 aa12□□□□□ -0.49
ABCF3-217ENST00000489719 TAGLN2P37802 199 aaKnown RBP12□□□□□ -0.49
ABCF3-217ENST00000489719 RAB4BP61018 213 aa12□□□□□ -0.49
ABCF3-217ENST00000489719 Q9HAA7 133 aa12□□□□□ -0.49
ABCF3-217ENST00000489719 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
ABCF3-217ENST00000489719 C9orf62Q8N4C0 152 aa11.99□□□□□ -0.49
ABCF3-217ENST00000489719 SMIM12Q96EX1 92 aa11.99□□□□□ -0.49
ABCF3-217ENST00000489719 BIN3Q9NQY0 253 aa11.99□□□□□ -0.49
ABCF3-217ENST00000489719 TRBV7-3A0A075B6L6 115 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 F5H697 171 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 IGLV2-8P01709 118 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 SMIM17P0DL12 118 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 ZNF56Q15929 161 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 OR2D3Q8NGH3 330 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
ABCF3-217ENST00000489719 XKRY2A2RUG3 117 aa11.97□□□□□ -0.49
ABCF3-217ENST00000489719 BLOC1S1P78537 153 aa11.97□□□□□ -0.49
ABCF3-217ENST00000489719 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
ABCF3-217ENST00000489719 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
ABCF3-217ENST00000489719 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 P01737 135 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.49
ABCF3-217ENST00000489719 LAGE3Q14657 143 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 TOR2AQ5JU69 321 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-217ENST00000489719 FER1L6-AS1Q8NA97 138 aa11.96□□□□□ -0.49
ABCF3-217ENST00000489719 RYR1P21817 5038 aa11.96□□□□□ -0.5
ABCF3-217ENST00000489719 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
ABCF3-217ENST00000489719 GZMBP10144 247 aa11.95□□□□□ -0.5
ABCF3-217ENST00000489719 UBE2D3P61077 147 aa11.95□□□□□ -0.5
ABCF3-217ENST00000489719 UBE2D2P62837 147 aa11.95□□□□□ -0.5
ABCF3-217ENST00000489719 ALKAL2Q6UX46 152 aa11.95□□□□□ -0.5
ABCF3-217ENST00000489719 DAZ4Q86SG3 579 aaKnown RBP11.95□□□□□ -0.5
ABCF3-217ENST00000489719 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
ABCF3-217ENST00000489719 DAZ3Q9NR90 486 aaKnown RBP11.95□□□□□ -0.5
ABCF3-217ENST00000489719 MAPKAPK5-AS1Q8N8E1 139 aa11.94□□□□□ -0.5
ABCF3-217ENST00000489719 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
ABCF3-217ENST00000489719 KRTAP17-1Q9BYP8 105 aa11.94□□□□□ -0.5
ABCF3-217ENST00000489719 A0A087WX48 190 aa11.93□□□□□ -0.5
ABCF3-217ENST00000489719 RBFOX3A6NFN3 312 aa11.93□□□□□ -0.5
ABCF3-217ENST00000489719 F2Z2F3 143 aa11.93□□□□□ -0.5
ABCF3-217ENST00000489719 CACNG7P62955 275 aa11.93□□□□□ -0.5
ABCF3-217ENST00000489719 Q8N3U1 123 aa11.93□□□□□ -0.5
ABCF3-217ENST00000489719 NEXN-AS1Q8NBZ9 246 aa11.93□□□□□ -0.5
ABCF3-217ENST00000489719 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
ABCF3-217ENST00000489719 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
ABCF3-217ENST00000489719 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
ABCF3-217ENST00000489719 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
ABCF3-217ENST00000489719 ELOBQ15370 118 aa11.92□□□□□ -0.5
ABCF3-217ENST00000489719 NIT1Q86X76 327 aa11.92□□□□□ -0.5
ABCF3-217ENST00000489719 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
ABCF3-217ENST00000489719 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
ABCF3-217ENST00000489719 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
ABCF3-217ENST00000489719 KIF25-AS1Q9Y6Z4 181 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms