RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 A0A1W2PPQ1 181 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 F2Z2F3 143 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 K7EQD1 137 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 GYPEP15421 78 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
FDPS-213ENST00000489003 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 ISOC2Q96AB3 205 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 MSRB1Q9NZV6 116 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 DNAH6Q9C0G6 4158 aa10.5□□□□□ -0.73
FDPS-213ENST00000489003 A8MWL6 223 aa10.49□□□□□ -0.73
FDPS-213ENST00000489003 CACNG7P62955 275 aa10.49□□□□□ -0.73
FDPS-213ENST00000489003 FAM74A4Q5TZK3 123 aa10.49□□□□□ -0.73
FDPS-213ENST00000489003 WDR73Q6P4I2 378 aa10.49□□□□□ -0.73
FDPS-213ENST00000489003 UBE2DNLQ8IWF7 75 aa10.49□□□□□ -0.73
FDPS-213ENST00000489003 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
FDPS-213ENST00000489003 RHODO00212 210 aa10.48□□□□□ -0.73
FDPS-213ENST00000489003 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
FDPS-213ENST00000489003 CCL18P55774 89 aa10.48□□□□□ -0.73
FDPS-213ENST00000489003 ADIRFQ15847 76 aa10.48□□□□□ -0.73
FDPS-213ENST00000489003 CT83Q5H943 113 aa10.48□□□□□ -0.73
FDPS-213ENST00000489003 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
FDPS-213ENST00000489003 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
FDPS-213ENST00000489003 KMT2AQ03164 3969 aa10.48□□□□□ -0.73
FDPS-213ENST00000489003 NTF3P20783 257 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 LINC00315P59091 139 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 LYPD5Q6UWN5 251 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 C15orf54Q8N8G6 183 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 OR10G8Q8NGN5 311 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 PRADC1Q9BSG0 188 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 Q9UF83 564 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 V9GYV3 84 aa10.47□□□□□ -0.73
FDPS-213ENST00000489003 SRIP30626 198 aa10.46□□□□□ -0.73
FDPS-213ENST00000489003 CTRLP40313 264 aa10.46□□□□□ -0.73
FDPS-213ENST00000489003 RHOHQ15669 191 aa10.46□□□□□ -0.73
FDPS-213ENST00000489003 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.73
FDPS-213ENST00000489003 CNFNQ9BYD5 112 aa10.46□□□□□ -0.73
FDPS-213ENST00000489003 LINC00862A6NCI5 91 aa10.45□□□□□ -0.74
FDPS-213ENST00000489003 FAM3BP58499 235 aaPredicted RBP10.45□□□□□ -0.74
FDPS-213ENST00000489003 UQCC3Q6UW78 93 aa10.45□□□□□ -0.74
FDPS-213ENST00000489003 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
FDPS-213ENST00000489003 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
FDPS-213ENST00000489003 RAB4BP61018 213 aa10.44□□□□□ -0.74
FDPS-213ENST00000489003 TWIST1Q15672 202 aa10.44□□□□□ -0.74
FDPS-213ENST00000489003 ZNRF2Q8NHG8 242 aa10.44□□□□□ -0.74
FDPS-213ENST00000489003 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
FDPS-213ENST00000489003 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 EVI2AP22794 236 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 GAGE1Q13065 139 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 GAGE4Q13068 117 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 GAGE5Q13069 117 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 GAGE13Q4V321 117 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 COMMD7Q86VX2 200 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 AP1S3Q96PC3 154 aa10.43□□□□□ -0.74
FDPS-213ENST00000489003 MRPS16Q9Y3D3 137 aaKnown RBP10.43□□□□□ -0.74
FDPS-213ENST00000489003 IGLV2-18A0A075B6J9 118 aa10.42□□□□□ -0.74
FDPS-213ENST00000489003 TMEM218A2RU14 115 aa10.42□□□□□ -0.74
FDPS-213ENST00000489003 F5H697 171 aa10.42□□□□□ -0.74
FDPS-213ENST00000489003 UPK3BQ9BT76 320 aa10.42□□□□□ -0.74
FDPS-213ENST00000489003 Q9H8V8 135 aa10.42□□□□□ -0.74
FDPS-213ENST00000489003 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
FDPS-213ENST00000489003 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
FDPS-213ENST00000489003 LINC00694P0DN24 101 aa10.41□□□□□ -0.74
FDPS-213ENST00000489003 ZNF56Q15929 161 aa10.41□□□□□ -0.74
FDPS-213ENST00000489003 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
FDPS-213ENST00000489003 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
FDPS-213ENST00000489003 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
FDPS-213ENST00000489003 M0R2N4 97 aa10.4□□□□□ -0.74
FDPS-213ENST00000489003 ADCYAP1P18509 176 aa10.4□□□□□ -0.74
FDPS-213ENST00000489003 TIRAPP58753 221 aa10.4□□□□□ -0.74
FDPS-213ENST00000489003 DPH3P1Q9H4G8 78 aa10.4□□□□□ -0.74
FDPS-213ENST00000489003 DNAH2Q9P225 4427 aa10.4□□□□□ -0.74
FDPS-213ENST00000489003 A0A1B0GUT8 65 aa10.39□□□□□ -0.75
FDPS-213ENST00000489003 SMIM27A0A1W2PRY6 76 aa10.39□□□□□ -0.75
FDPS-213ENST00000489003 F8W036 122 aa10.39□□□□□ -0.75
FDPS-213ENST00000489003 MGPP08493 103 aa10.39□□□□□ -0.75
FDPS-213ENST00000489003 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
FDPS-213ENST00000489003 M0QY20 66 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 Q6ZR54 194 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 NEXN-AS1Q8NBZ9 246 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 BORCS7Q96B45 105 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 NAT8BQ9UHF3 227 aa10.38□□□□□ -0.75
FDPS-213ENST00000489003 DNAH17Q9UFH2 4485 aa10.37□□□□□ -0.75
FDPS-213ENST00000489003 TRBV7-3A0A075B6L6 115 aa10.37□□□□□ -0.75
FDPS-213ENST00000489003 PPP1R2P9O14990 202 aa10.37□□□□□ -0.75
FDPS-213ENST00000489003 UBE2D3P61077 147 aa10.37□□□□□ -0.75
FDPS-213ENST00000489003 UBE2D2P62837 147 aa10.37□□□□□ -0.75
FDPS-213ENST00000489003 RPL36AP83881 106 aaKnown RBP10.37□□□□□ -0.75
FDPS-213ENST00000489003 RPL36ALQ969Q0 106 aaKnown RBP10.37□□□□□ -0.75
FDPS-213ENST00000489003 NBDYA0A0U1RRE5 68 aa10.36□□□□□ -0.75
FDPS-213ENST00000489003 SIVA1O15304 175 aa10.36□□□□□ -0.75
FDPS-213ENST00000489003 RIGQ13278 110 aa10.36□□□□□ -0.75
FDPS-213ENST00000489003 SMIM15Q7Z3B0 74 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms