RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TMEM183AQ8IXX5 376 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 OR8A1Q8NGG7 326 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 ZNF563Q8TA94 476 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 C16orf95Q9H693 158 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 ZNF286AQ9HBT8 521 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 IL36BQ9NZH7 164 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 FAM215AQ9Y5M1 114 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 IGLV4-3A0A075B6K6 122 aa4□□□□□ -1.77
SF1-217ENST00000486960 TRBV20-1A0A075B6N2 111 aa4□□□□□ -1.77
SF1-217ENST00000486960 IGHV3-74A0A0B4J1X5 117 aa4□□□□□ -1.77
SF1-217ENST00000486960 IGLC7A0M8Q6 106 aa4□□□□□ -1.77
SF1-217ENST00000486960 OOSP1A8MZH6 123 aa4□□□□□ -1.77
SF1-217ENST00000486960 BUB1B-PAK6H3BSN5 160 aa4□□□□□ -1.77
SF1-217ENST00000486960 M0R233 179 aa4□□□□□ -1.77
SF1-217ENST00000486960 GYPAP02724 150 aa4□□□□□ -1.77
SF1-217ENST00000486960 NMBP08949 121 aa4□□□□□ -1.77
SF1-217ENST00000486960 TRGC1P0CF51 173 aa4□□□□□ -1.77
SF1-217ENST00000486960 SLC25A4P12235 298 aa4□□□□□ -1.77
SF1-217ENST00000486960 ASIPP42127 132 aa4□□□□□ -1.77
SF1-217ENST00000486960 CSN1S1P47710 185 aa4□□□□□ -1.77
SF1-217ENST00000486960 DSCR4P56555 118 aaPredicted RBP4□□□□□ -1.77
SF1-217ENST00000486960 SMIM11AP58511 58 aa4□□□□□ -1.77
SF1-217ENST00000486960 EBI3Q14213 229 aa4□□□□□ -1.77
SF1-217ENST00000486960 FAM104AQ969W3 186 aa4□□□□□ -1.77
SF1-217ENST00000486960 SHANK2-AS3Q9BTD1 123 aa4□□□□□ -1.77
SF1-217ENST00000486960 TTTY12Q9BZ98 90 aa4□□□□□ -1.77
SF1-217ENST00000486960 Q9H3A6 140 aa4□□□□□ -1.77
SF1-217ENST00000486960 V9GYH0 126 aa4□□□□□ -1.77
SF1-217ENST00000486960 ZFP92A6NM28 416 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 DEFB108AA8MXU0 73 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 PITX3O75364 302 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 NDUFB6O95139 128 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 SFT2D2O95562 160 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 ASAH2BP0C7U1 165 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 TPT1P13693 172 aaKnown RBP3.99□□□□□ -1.77
SF1-217ENST00000486960 DSCR9P59020 149 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 FGF12P61328 243 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 RPL30P62888 115 aaKnown RBP3.99□□□□□ -1.77
SF1-217ENST00000486960 EGFEM1PQ0D2K5 195 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 ZNF79Q15937 498 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 KPRPQ5T749 579 aaPredicted RBP3.99□□□□□ -1.77
SF1-217ENST00000486960 C9orf66Q5T8R8 295 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 C12orf73Q69YU5 71 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 ZNF497Q6ZNH5 498 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 NRACQ8N912 160 aa3.99□□□□□ -1.77
SF1-217ENST00000486960 RNASE6Q93091 150 aaKnown RBP3.99□□□□□ -1.77
SF1-217ENST00000486960 TRGV5A0A0B4J1U4 118 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 IGHV3-15A0A0B4J1V0 119 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 IGHV3-16A0A0C4DH30 117 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 SMIM1B2RUZ4 78 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 YPEL1O60688 119 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 HBDP02042 147 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 LINC00205P59089 165 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 NPC2P61916 151 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 MRPS36P82909 103 aaKnown RBP3.98□□□□□ -1.77
SF1-217ENST00000486960 RPL18Q07020 188 aaKnown RBP3.98□□□□□ -1.77
SF1-217ENST00000486960 TDRG1Q3Y452 100 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 LGALS9CQ6DKI2 356 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 C2orf66Q6UXQ4 117 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 SLC25A29Q8N8R3 303 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 VSIG2Q96IQ7 327 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 SLC35B3Q9H1N7 401 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 EPDR1Q9UM22 224 aa3.98□□□□□ -1.77
SF1-217ENST00000486960 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 IGKV1-9A0A0C4DH69 117 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 C7orf66A4D0T2 115 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
SF1-217ENST00000486960 C3orf84H3BNL1 204 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 K7ERJ3 54 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 UBL3O95164 117 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 CGAP01215 116 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 CD3DP04234 171 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 GYPBP06028 91 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 ZNF32P17041 273 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 BSPH1Q075Z2 132 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 ADIRFQ15847 76 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 C7orf65Q6ZTY9 151 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 CD177Q8N6Q3 437 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 Q96M85 177 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 ZNF714Q96N38 554 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 OR5V1Q9UGF6 321 aa3.97□□□□□ -1.77
SF1-217ENST00000486960 LSM2Q9Y333 95 aaKnown RBP3.97□□□□□ -1.77
SF1-217ENST00000486960 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.77
SF1-217ENST00000486960 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.96□□□□□ -1.78
SF1-217ENST00000486960 MUC21A0A0G2JKD1 596 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 SSSCA1O60232 199 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 HLA-DQA1P01909 254 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 SNRPGP62308 76 aaKnown RBP3.96□□□□□ -1.78
SF1-217ENST00000486960 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 MPV17L2Q567V2 206 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 CEMP1Q6PRD7 247 aaPredicted RBP3.96□□□□□ -1.78
SF1-217ENST00000486960 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
SF1-217ENST00000486960 NPCDR1Q9BY65 106 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 RABAC1Q9UI14 185 aa3.96□□□□□ -1.78
SF1-217ENST00000486960 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
SF1-217ENST00000486960 MED12LQ86YW9 2145 aa3.95□□□□□ -1.78
SF1-217ENST00000486960 IGLV8-61A0A075B6I0 122 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms