RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 BCL2P10415 239 aa10.14□□□□□ -0.79
YIF1A-208ENST00000485820 EVI2AP22794 236 aa10.14□□□□□ -0.79
YIF1A-208ENST00000485820 GTSF1LQ9H1H1 148 aa10.14□□□□□ -0.79
YIF1A-208ENST00000485820 TRBV20OR9-2A0A075B6H5 130 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 SNAI2O43623 268 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 GAGE1Q13065 139 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 GAGE4Q13068 117 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 GAGE5Q13069 117 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 GAGE13Q4V321 117 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 LELP1Q5T871 98 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 ALKAL2Q6UX46 152 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 MED9Q9NWA0 146 aa10.13□□□□□ -0.79
YIF1A-208ENST00000485820 TRAV8-6A0A0B4J262 113 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 C19orf71A6NCJ1 209 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 OR5AL1P0C617 328 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 TAGLN2P37802 199 aaKnown RBP10.12□□□□□ -0.79
YIF1A-208ENST00000485820 GNG4P50150 75 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 NKX2-5P52952 324 aaPredicted RBP10.12□□□□□ -0.79
YIF1A-208ENST00000485820 LINC01556Q5JQF7 62 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 SMIM12Q96EX1 92 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
YIF1A-208ENST00000485820 BLOC1S1P78537 153 aa10.11□□□□□ -0.79
YIF1A-208ENST00000485820 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
YIF1A-208ENST00000485820 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
YIF1A-208ENST00000485820 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
YIF1A-208ENST00000485820 MUC21A0A140T8X8 626 aa10.1□□□□□ -0.79
YIF1A-208ENST00000485820 SPATA12Q7Z6I5 190 aa10.1□□□□□ -0.79
YIF1A-208ENST00000485820 HERC2O95714 4834 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 C16orf90A8MZG2 172 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 GZMBP10144 247 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 C10orf126Q8N4M7 172 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
YIF1A-208ENST00000485820 DAZAP1Q96EP5 407 aaKnown RBP10.09□□□□□ -0.79
YIF1A-208ENST00000485820 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
YIF1A-208ENST00000485820 RBFOX3A6NFN3 312 aa10.08□□□□□ -0.8
YIF1A-208ENST00000485820 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
YIF1A-208ENST00000485820 RAB4BP61018 213 aa10.08□□□□□ -0.8
YIF1A-208ENST00000485820 SSTP61278 116 aa10.08□□□□□ -0.8
YIF1A-208ENST00000485820 SPANXN1Q5VSR9 72 aa10.08□□□□□ -0.8
YIF1A-208ENST00000485820 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
YIF1A-208ENST00000485820 IGHV3-30P01768 117 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 IGHV3-30-3P0DP02 117 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 IGHV3-30-5P0DP03 117 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 OCC1Q8TAD7 63 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 BIN3Q9NQY0 253 aa10.07□□□□□ -0.8
YIF1A-208ENST00000485820 TRBV7-3A0A075B6L6 115 aa10.06□□□□□ -0.8
YIF1A-208ENST00000485820 A0A087WWC5 75 aa10.06□□□□□ -0.8
YIF1A-208ENST00000485820 UBE2D3P61077 147 aa10.06□□□□□ -0.8
YIF1A-208ENST00000485820 UBE2D2P62837 147 aa10.06□□□□□ -0.8
YIF1A-208ENST00000485820 FER1L6-AS1Q8NA97 138 aa10.06□□□□□ -0.8
YIF1A-208ENST00000485820 OR10G8Q8NGN5 311 aa10.06□□□□□ -0.8
YIF1A-208ENST00000485820 A0A087WTM6 91 aa10.05□□□□□ -0.8
YIF1A-208ENST00000485820 K7EN84 100 aa10.05□□□□□ -0.8
YIF1A-208ENST00000485820 P01737 135 aa10.05□□□□□ -0.8
YIF1A-208ENST00000485820 RPL36AP83881 106 aaKnown RBP10.05□□□□□ -0.8
YIF1A-208ENST00000485820 Q8N3U1 123 aa10.05□□□□□ -0.8
YIF1A-208ENST00000485820 RPL36ALQ969Q0 106 aaKnown RBP10.05□□□□□ -0.8
YIF1A-208ENST00000485820 F2Z2F3 143 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 ZNF56Q15929 161 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 NEXN-AS1Q8NBZ9 246 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 LRP1BQ9NZR2 4599 aa10.04□□□□□ -0.8
YIF1A-208ENST00000485820 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
YIF1A-208ENST00000485820 ERVFC1-1P60608 527 aa10.03□□□□□ -0.8
YIF1A-208ENST00000485820 CACNG7P62955 275 aa10.03□□□□□ -0.8
YIF1A-208ENST00000485820 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
YIF1A-208ENST00000485820 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
YIF1A-208ENST00000485820 F5H697 171 aa10.02□□□□□ -0.81
YIF1A-208ENST00000485820 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
YIF1A-208ENST00000485820 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
YIF1A-208ENST00000485820 NIT1Q86X76 327 aa10.02□□□□□ -0.81
YIF1A-208ENST00000485820 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
YIF1A-208ENST00000485820 LRCOL1A6NCL2 159 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 EREGO14944 169 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 NDUFS6O75380 124 aaKnown RBP10.01□□□□□ -0.81
YIF1A-208ENST00000485820 SMIM17P0DL12 118 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 NTF3P20783 257 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 LAGE3Q14657 143 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 TOR2AQ5JU69 321 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 WDR73Q6P4I2 378 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 AP1S3Q96PC3 154 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 Q9HAA7 133 aa10.01□□□□□ -0.81
YIF1A-208ENST00000485820 CDK2AP2O75956 126 aa10□□□□□ -0.81
YIF1A-208ENST00000485820 FAM210AQ96ND0 272 aa10□□□□□ -0.81
YIF1A-208ENST00000485820 KRTAP17-1Q9BYP8 105 aa10□□□□□ -0.81
YIF1A-208ENST00000485820 EIF5A2Q9GZV4 153 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms