RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TRAV8-6A0A0B4J262 113 aa10.78□□□□□ -0.68
CHD3-211ENST00000481999 DPM2O94777 84 aa10.78□□□□□ -0.68
CHD3-211ENST00000481999 H3BRM9 83 aa10.77□□□□□ -0.69
CHD3-211ENST00000481999 GNRH2O43555 120 aa10.77□□□□□ -0.69
CHD3-211ENST00000481999 MUC4Q99102 2169 aa10.77□□□□□ -0.69
CHD3-211ENST00000481999 F8P00451 2351 aa10.77□□□□□ -0.69
CHD3-211ENST00000481999 CD28P10747 220 aa10.77□□□□□ -0.69
CHD3-211ENST00000481999 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
CHD3-211ENST00000481999 FAM19A4Q96LR4 140 aa10.76□□□□□ -0.69
CHD3-211ENST00000481999 AP1S3Q96PC3 154 aa10.76□□□□□ -0.69
CHD3-211ENST00000481999 ASIPP42127 132 aa10.76□□□□□ -0.69
CHD3-211ENST00000481999 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 C9orf118A6NHY6 69 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 K7EQG2 157 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 S100A4P26447 101 aaKnown RBP10.75□□□□□ -0.69
CHD3-211ENST00000481999 HIGD1BQ9P298 99 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 LINC01619G3V211 115 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 RBX1P62877 108 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 TMEM61Q8N0U2 210 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 SMIM2Q9BVW6 85 aa10.75□□□□□ -0.69
CHD3-211ENST00000481999 IGKV2D-26A0A0A0MRZ7 120 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 M0R381 172 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 LGALS9O00182 355 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 C4orf3Q8WVX3 66 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 CITED2Q99967 270 aaPredicted RBP10.74□□□□□ -0.69
CHD3-211ENST00000481999 HLA-DRB4P13762 266 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 LINC01006Q8NI28 216 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 HLA-DRB4X5D2U9 266 aa10.74□□□□□ -0.69
CHD3-211ENST00000481999 GAGE10A6NGK3 116 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 ID1P41134 155 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 RAX2Q96IS3 184 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 MRPL35Q9NZE8 188 aaKnown RBP10.73□□□□□ -0.69
CHD3-211ENST00000481999 PHLDA3Q9Y5J5 127 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 PRM2P04554 102 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 ORMDL2Q53FV1 153 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 GTF2H5Q6ZYL4 71 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 GTSCR1Q86UQ5 136 aa10.73□□□□□ -0.69
CHD3-211ENST00000481999 A0A087WX48 190 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
CHD3-211ENST00000481999 SUMO2P61956 95 aaKnown RBP10.72□□□□□ -0.69
CHD3-211ENST00000481999 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 TMEM160Q9NX00 188 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 A0A0J9YX75 114 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 K7EMI3 77 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 LY6G6DO95868 133 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 PLNP26678 52 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 CDKN1BP46527 198 aa10.72□□□□□ -0.69
CHD3-211ENST00000481999 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
CHD3-211ENST00000481999 GAGE12BA1L429 117 aa10.71□□□□□ -0.69
CHD3-211ENST00000481999 CHAC1Q9BUX1 264 aa10.71□□□□□ -0.69
CHD3-211ENST00000481999 KLLNB2CW77 178 aa10.71□□□□□ -0.7
CHD3-211ENST00000481999 H3BUT2 72 aa10.71□□□□□ -0.7
CHD3-211ENST00000481999 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.7
CHD3-211ENST00000481999 C14orf178Q8N769 122 aaPredicted RBP10.71□□□□□ -0.7
CHD3-211ENST00000481999 RASL10AQ92737 203 aa10.71□□□□□ -0.7
CHD3-211ENST00000481999 ATRQ13535 2644 aa10.7□□□□□ -0.7
CHD3-211ENST00000481999 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
CHD3-211ENST00000481999 DEFB131AP59861 70 aa10.7□□□□□ -0.7
CHD3-211ENST00000481999 UFSP1Q6NVU6 142 aa10.7□□□□□ -0.7
CHD3-211ENST00000481999 JPT2Q9H910 190 aa10.7□□□□□ -0.7
CHD3-211ENST00000481999 TEP1Q99973 2627 aaKnown RBP10.7□□□□□ -0.7
CHD3-211ENST00000481999 TRBV25-1A0A075B6N4 114 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 PPP1R17O96001 155 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 CD300EQ496F6 205 aaPredicted RBP10.69□□□□□ -0.7
CHD3-211ENST00000481999 OCIAD2Q56VL3 154 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 SAMD13Q5VXD3 122 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 JMJD8Q96S16 334 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 TTTY13Q9BZ97 58 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 GCSHP23434 173 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 DEFB104AQ8WTQ1 72 aa10.69□□□□□ -0.7
CHD3-211ENST00000481999 H7C1H1 209 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 K7EP34 96 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 INAFM1C9JVW0 142 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 F8VRH5 84 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 RNASE1P07998 156 aaKnown RBP10.68□□□□□ -0.7
CHD3-211ENST00000481999 MGPP08493 103 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 SMIM13P0DJ93 91 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
CHD3-211ENST00000481999 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 HTN1P15515 57 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
CHD3-211ENST00000481999 RAB37Q96AX2 223 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
CHD3-211ENST00000481999 CD7P09564 240 aa10.67□□□□□ -0.7
CHD3-211ENST00000481999 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
CHD3-211ENST00000481999 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
CHD3-211ENST00000481999 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
CHD3-211ENST00000481999 CCL24O00175 119 aa10.67□□□□□ -0.7
CHD3-211ENST00000481999 NXPH4O95158 308 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms