RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 SHANK1Q9Y566 2161 aa2□□□□□ -2.09
FN1-221ENST00000480737 MUC6Q6W4X9 2439 aa2□□□□□ -2.09
FN1-221ENST00000480737 NCKAP5O14513 1909 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 CACNA1GO43497 2377 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 IGHV3-72A0A0B4J1Y9 119 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 IGHV1-24A0A0C4DH33 117 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 C7orf71A4D174 169 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 OR2T8A6NH00 312 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 LINC01619G3V211 115 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 H7C1H1 209 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 OVOL1O14753 267 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 TCF21O43680 179 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 SPINK4O60575 86 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 CTSGP08311 255 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 SLC25A16P16260 332 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 PLNP26678 52 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 CKS2P33552 79 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 ZNF138P52744 262 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 CKS1BP61024 79 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 GNG5P63218 68 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 RHOGP84095 191 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 DIAPH2-AS1Q14236 149 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 PMVKQ15126 192 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 LCN12Q6JVE5 192 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 GTF2H5Q6ZYL4 71 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 AMN1Q8IY45 258 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 C1orf158Q8N1D5 194 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 ZC2HC1AQ96GY0 325 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 PRELID3AQ96N28 172 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 AP1S3Q96PC3 154 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 MRPL36Q9P0J6 103 aaKnown RBP1.99□□□□□ -2.09
FN1-221ENST00000480737 HILPDAQ9Y5L2 63 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 ZNF292O60281 2723 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 EYSQ5T1H1 3165 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 PI4KAP42356 2102 aa1.99□□□□□ -2.09
FN1-221ENST00000480737 SDK1Q7Z5N4 2213 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 IGHV7-81A0A0B4J1V7 117 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 TRAV41A0A0B4J266 112 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 TRAV21A0A0B4J279 112 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 M0R381 172 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 NDUFA4O00483 81 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 NPFFO15130 113 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 CD5LO43866 347 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 SH2D1AO60880 128 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 DUSP14O95147 198 aaKnown RBP1.98□□□□□ -2.09
FN1-221ENST00000480737 IGHV3-48P01763 117 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 ARMS2P0C7Q2 107 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 IGLC6P0CF74 106 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 COX8AP10176 69 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 ZNF25P17030 456 aaPredicted RBP1.98□□□□□ -2.09
FN1-221ENST00000480737 CNTFRP26992 372 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 FCER1GP30273 86 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 ORMDL2Q53FV1 153 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 KLF17Q5JT82 389 aaPredicted RBP1.98□□□□□ -2.09
FN1-221ENST00000480737 C9orf129Q5T035 196 aaKnown RBP1.98□□□□□ -2.09
FN1-221ENST00000480737 GDF5OSQ5U4N7 250 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 UNQ5815/PRO19632Q6UWF5 114 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 LYZL1Q6UWQ5 148 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 EXOC3-AS1Q8N2X6 119 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 FAM19A2Q8N3H0 131 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 Q8N8P6 123 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 Q8N976 141 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 Q8N9W7 124 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 OR2K2Q8NGT1 345 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 OR10J6PQ8NGY7 276 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 ZNRF2Q8NHG8 242 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 LINC01006Q8NI28 216 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 MYOZ3Q8TDC0 251 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 DNAJC30Q96LL9 226 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 C9orf85Q96MD7 179 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 ODF3Q96PU9 254 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 C20orf78Q9BR46 151 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 ZNRD1Q9P1U0 126 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 HIGD1BQ9P298 99 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 SPTBN5Q9NRC6 3674 aaKnown RBP1.98□□□□□ -2.09
FN1-221ENST00000480737 FAM186AA6NE01 2351 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 CACNA1HO95180 2353 aa1.98□□□□□ -2.09
FN1-221ENST00000480737 PRRC2CQ9Y520 2896 aaKnown RBP1.97□□□□□ -2.09
FN1-221ENST00000480737 VCANP13611 3396 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 TRAV8-1A0A0A6YYK1 113 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 TRAV12-1A0A0B4J245 112 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 IGHV1-69DA0A0B4J2H0 117 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 IGHV3-35A0A0C4DH35 117 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 RBMY1BA6NDE4 496 aaKnown RBP1.97□□□□□ -2.09
FN1-221ENST00000480737 RBMY1EA6NEQ0 496 aaKnown RBP1.97□□□□□ -2.09
FN1-221ENST00000480737 B4DSR2 109 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 D6R8Y8 96 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 LYNX1G3V0Z9 82 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 K7ERU9 68 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 ZNF207O43670 478 aaKnown RBP1.97□□□□□ -2.09
FN1-221ENST00000480737 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 DPM2O94777 84 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 IGHV1-69P01742 117 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 RBMY1DP0C7P1 496 aaKnown RBP1.97□□□□□ -2.09
FN1-221ENST00000480737 RBMY1A1P0DJD3 496 aaKnown RBP1.97□□□□□ -2.09
FN1-221ENST00000480737 APELAP0DMC3 54 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 LYNX1P0DP58 116 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 IGLL1P15814 213 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 EVI2AP22794 236 aa1.97□□□□□ -2.09
FN1-221ENST00000480737 ASIPP42127 132 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms