RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 ZNF142P52746 1687 aaPredicted RBP1.95□□□□□ -2.1
ITGB1-212ENST00000480226 BAZ2BQ9UIF8 2168 aaKnown RBP1.95□□□□□ -2.1
ITGB1-212ENST00000480226 MARF1Q9Y4F3 1742 aaKnown RBP1.94□□□□□ -2.1
ITGB1-212ENST00000480226 CTTNBP2Q8WZ74 1663 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 DLG5Q8TDM6 1919 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 UBE2L5PA0A1B0GUS4 154 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 IGLC1P0CG04 106 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 POLR2JP52435 117 aaKnown RBP1.94□□□□□ -2.1
ITGB1-212ENST00000480226 UBE2L3P68036 154 aaKnown RBP1.94□□□□□ -2.1
ITGB1-212ENST00000480226 Q1T7F1 81 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 SLC48A1Q6P1K1 146 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 PLXNA1Q9UIW2 1896 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 UNC13CQ8NB66 2214 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 PXDNLA1KZ92 1463 aa1.94□□□□□ -2.1
ITGB1-212ENST00000480226 FREM1Q5H8C1 2179 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 RTEL1-TNFRSF6BF6WH68 1400 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 SCAPERQ9BY12 1400 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 SPTBP11277 2137 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 ABCC3O15438 1527 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 PDCD11Q14690 1871 aaKnown RBP1.93□□□□□ -2.1
ITGB1-212ENST00000480226 TRAV2A0A0B4J234 112 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 LINC00032P0C843 101 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
ITGB1-212ENST00000480226 DCDP81605 110 aaKnown RBP1.93□□□□□ -2.1
ITGB1-212ENST00000480226 RHOHQ15669 191 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 IGFBP7Q16270 282 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 SHANK2Q9UPX8 1470 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 STRCP1A6NGW2 1772 aa1.93□□□□□ -2.1
ITGB1-212ENST00000480226 DAPK1P53355 1430 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 NRXN2Q9P2S2 1712 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 TRBV6-8A0A0A6YYG3 113 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 H3BQF6 201 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 GNGT2O14610 69 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 CBLN1P23435 193 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 ATP5EP56381 51 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-212ENST00000480226 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 Q0VG73 95 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 IQCJQ1A5X6 159 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 C9orf116Q5BN46 136 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-212ENST00000480226 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 SPTSSBQ8NFR3 76 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 C10orf82Q8WW14 230 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 LINC00052Q96N35 136 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 ATG5Q9H1Y0 275 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 LINC00474Q9P2X8 69 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 LOC285556D6RIA3 1793 aa1.92□□□□□ -2.1
ITGB1-212ENST00000480226 MAP3K1Q13233 1512 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 UBR1Q8IWV7 1749 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 DLEC1Q9Y238 1755 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 DNMBPQ6XZF7 1577 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 IFT140Q96RY7 1462 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 ANKRD36BQ8N2N9 1353 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 CXorf51AA0A1B0GTR3 108 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 TMEM30CPA0ZSE6 113 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 F8W1H4 67 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 SSSCA1O60232 199 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
ITGB1-212ENST00000480226 UNQ5815/PRO19632Q6UWF5 114 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 COMMD6Q7Z4G1 85 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 ZNF431Q8TF32 576 aaPredicted RBP1.91□□□□□ -2.1
ITGB1-212ENST00000480226 PPDPFLQ8WWR9 84 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 PATE1Q8WXA2 126 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 NPVFQ9HCQ7 196 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 SUPT6HQ7KZ85 1726 aaKnown RBP1.91□□□□□ -2.1
ITGB1-212ENST00000480226 DOCK10Q96BY6 2186 aa1.91□□□□□ -2.1
ITGB1-212ENST00000480226 MDC1Q14676 2089 aaKnown RBP1.9□□□□□ -2.1
ITGB1-212ENST00000480226 FN1P02751 2386 aaKnown RBP1.9□□□□□ -2.11
ITGB1-212ENST00000480226 AFDNP55196 1824 aaKnown RBP1.9□□□□□ -2.11
ITGB1-212ENST00000480226 TNRC6BQ9UPQ9 1833 aaKnown RBP1.9□□□□□ -2.11
ITGB1-212ENST00000480226 UQCRHLA0A096LP55 91 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 hADV29S1A0JD25 119 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 CCL16O15467 120 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 UQCRHP07919 91 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 LYPD5Q6UWN5 251 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 OR10AG1Q8NH19 301 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 LCN9Q8WX39 176 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 PMCHL2Q9BQD1 86 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 ORMDL1Q9P0S3 153 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 GBF1Q92538 1859 aa1.9□□□□□ -2.11
ITGB1-212ENST00000480226 ARFGEF3Q5TH69 2177 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 GOLGA3Q08378 1498 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 COL5A3P25940 1745 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-212ENST00000480226 IGKV2-24A0A0C4DH68 120 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 TRBV10-3A0A0K0K1G6 114 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 A6NIN4 97 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 H3BQ15 152 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 H3BRN7 92 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 IGHV3-33P01772 117 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 CCKP06307 115 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 IFI27L1Q96BM0 104 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 KDM5DQ9BY66 1539 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 CLTCQ00610 1675 aaKnown RBP1.89□□□□□ -2.11
ITGB1-212ENST00000480226 RREB1Q92766 1687 aa1.89□□□□□ -2.11
ITGB1-212ENST00000480226 CDK12Q9NYV4 1490 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-212ENST00000480226 TOP2BQ02880 1626 aa1.88□□□□□ -2.11
ITGB1-212ENST00000480226 DOCK11Q5JSL3 2073 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms