RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
DDX56-210ENST00000479440 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
DDX56-210ENST00000479440 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 B4DEV8 164 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 PET100P0DJ07 73 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 RAB2AP61019 212 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 CYCSP99999 105 aaKnown RBP10.26□□□□□ -0.77
DDX56-210ENST00000479440 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 SMIM3Q9BZL3 60 aa10.26□□□□□ -0.77
DDX56-210ENST00000479440 A0A087WWL8 130 aa10.25□□□□□ -0.77
DDX56-210ENST00000479440 FAM240BA0A1B0GVZ2 78 aa10.25□□□□□ -0.77
DDX56-210ENST00000479440 FABP5P3A8MUU1 101 aa10.25□□□□□ -0.77
DDX56-210ENST00000479440 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
DDX56-210ENST00000479440 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
DDX56-210ENST00000479440 EPDR1Q9UM22 224 aa10.25□□□□□ -0.77
DDX56-210ENST00000479440 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.24□□□□□ -0.77
DDX56-210ENST00000479440 C7orf33Q8WU49 177 aa10.24□□□□□ -0.77
DDX56-210ENST00000479440 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
DDX56-210ENST00000479440 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 PTTG1O95997 202 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 STAG3L2P0CL84 134 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 STAG3L3P0CL85 134 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 CNBPP62633 177 aaKnown RBP10.23□□□□□ -0.77
DDX56-210ENST00000479440 DNLZQ5SXM8 178 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 DPH3Q96FX2 82 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 CHCHD5Q9BSY4 110 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
DDX56-210ENST00000479440 M0R381 172 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 TPT1P13693 172 aaKnown RBP10.22□□□□□ -0.77
DDX56-210ENST00000479440 GCHFRP30047 84 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 RPL12P30050 165 aaKnown RBP10.22□□□□□ -0.77
DDX56-210ENST00000479440 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
DDX56-210ENST00000479440 ZFP82Q8N141 532 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 OR10G8Q8NGN5 311 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 SUN5Q8TC36 379 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 PPP1R1CQ8WVI7 109 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
DDX56-210ENST00000479440 A0A087WYN8 130 aa10.21□□□□□ -0.77
DDX56-210ENST00000479440 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.77
DDX56-210ENST00000479440 MZT2BQ6NZ67 158 aa10.21□□□□□ -0.77
DDX56-210ENST00000479440 CLPSL2Q6UWE3 100 aa10.21□□□□□ -0.77
DDX56-210ENST00000479440 SPACA4Q8TDM5 124 aa10.21□□□□□ -0.77
DDX56-210ENST00000479440 TMEM167BQ9NRX6 74 aa10.21□□□□□ -0.77
DDX56-210ENST00000479440 PRR34Q9NV39 138 aa10.21□□□□□ -0.77
DDX56-210ENST00000479440 hDV102S1A0JD36 115 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 M0R036 132 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 PHOX2AO14813 284 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 CCDC32Q9BV29 185 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
DDX56-210ENST00000479440 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
DDX56-210ENST00000479440 GAS8-AS1O95177 125 aa10.19□□□□□ -0.78
DDX56-210ENST00000479440 ZNF56Q15929 161 aa10.19□□□□□ -0.78
DDX56-210ENST00000479440 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
DDX56-210ENST00000479440 Q86TA4 180 aa10.19□□□□□ -0.78
DDX56-210ENST00000479440 TRAV34A0A0B4J273 112 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 MPC2O95563 127 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 KRTAP26-1Q6PEX3 210 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 LINC00269Q8N2A0 174 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 RAB24Q969Q5 203 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 PLAC8Q9NZF1 115 aa10.18□□□□□ -0.78
DDX56-210ENST00000479440 A0A0J9YXV3 536 aa10.17□□□□□ -0.78
DDX56-210ENST00000479440 CXorf1O96002 111 aa10.17□□□□□ -0.78
DDX56-210ENST00000479440 RAB4BP61018 213 aa10.17□□□□□ -0.78
DDX56-210ENST00000479440 NEXN-AS1Q8NBZ9 246 aa10.17□□□□□ -0.78
DDX56-210ENST00000479440 WFDC1Q9HC57 220 aa10.17□□□□□ -0.78
DDX56-210ENST00000479440 SH2D1AO60880 128 aa10.16□□□□□ -0.78
DDX56-210ENST00000479440 IFNA7P01567 189 aa10.16□□□□□ -0.78
DDX56-210ENST00000479440 H2BFSP57053 126 aa10.16□□□□□ -0.78
DDX56-210ENST00000479440 RBX1P62877 108 aa10.16□□□□□ -0.78
DDX56-210ENST00000479440 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
DDX56-210ENST00000479440 FAM162BQ5T6X4 162 aa10.16□□□□□ -0.78
DDX56-210ENST00000479440 ENKURQ8TC29 256 aa10.16□□□□□ -0.78
DDX56-210ENST00000479440 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 A0A1W2PRE2 83 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 PEX7O00628 323 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 MBP02144 154 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 ODF1Q14990 250 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 REG3GQ6UW15 175 aa10.15□□□□□ -0.78
DDX56-210ENST00000479440 REG3AQ06141 175 aa10.14□□□□□ -0.79
DDX56-210ENST00000479440 GAGE6Q13070 117 aa10.14□□□□□ -0.79
DDX56-210ENST00000479440 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
DDX56-210ENST00000479440 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 TMSB15BA0A087X1C1 80 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 P01737 135 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 CRIP1P50238 77 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 GTSF1Q8WW33 167 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 PSMG3Q9BT73 122 aaPredicted RBP10.13□□□□□ -0.79
DDX56-210ENST00000479440 DERL1Q9BUN8 251 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 ACTR3CQ9C0K3 210 aaPredicted RBP10.13□□□□□ -0.79
DDX56-210ENST00000479440 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
DDX56-210ENST00000479440 ZFP30Q9Y2G7 519 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms