RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
VPS52-217ENST00000478934 CHD6Q8TD26 2715 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 PRSS29PA6NIE9 313 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 H7C1H1 209 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 DEFB136Q30KP8 78 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 TOMM6Q96B49 74 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 HIGD1BQ9P298 99 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 KIF25-AS1Q9Y6Z4 181 aa8.06□□□□□ -1.12
VPS52-217ENST00000478934 A0A096LNT2 108 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 KLLNB2CW77 178 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 BRI3O95415 125 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 CD300EQ496F6 205 aaPredicted RBP8.05□□□□□ -1.12
VPS52-217ENST00000478934 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 APRG1Q8IVJ8 170 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 NEXN-AS1Q8NBZ9 246 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 NACAE9PAV3 2078 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 IGHV4OR15-8A0A075B7B6 117 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 A0A087WW49 117 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 H3BMG7 143 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 PLNP26678 52 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 SPINK13Q1W4C9 94 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 DUX3Q96PT4 197 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 APCP25054 2843 aa8.05□□□□□ -1.12
VPS52-217ENST00000478934 TEX48A0A1B0GUV7 120 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 HLA-DRB4P13762 266 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 C12orf74Q32Q52 190 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 LINC01356Q8N9X3 169 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 HLA-DRB4X5D2U9 266 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 CCDC168Q8NDH2 2452 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 IGLL5B9A064 214 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 SUMO4Q6EEV6 95 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 PRADC1Q9BSG0 188 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 TM2D2Q9BX73 214 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
VPS52-217ENST00000478934 G3V4G9 280 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 CRYGDP07320 174 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 HTN1P15515 57 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 WFDC2Q14508 124 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
VPS52-217ENST00000478934 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
VPS52-217ENST00000478934 WNK1Q9H4A3 2382 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 MYMXA0A1B0GTQ4 84 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 K7EMT4 169 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 TSHBP01222 138 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 LGALS1P09382 135 aaKnown RBP8.03□□□□□ -1.12
VPS52-217ENST00000478934 SLC25A16P16260 332 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 SCGB2A2Q13296 93 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 ZNF479Q96JC4 524 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 NOTCH3Q9UM47 2321 aa8.03□□□□□ -1.12
VPS52-217ENST00000478934 HOXA3O43365 443 aaPredicted RBP8.02□□□□□ -1.12
VPS52-217ENST00000478934 ID1P41134 155 aa8.02□□□□□ -1.12
VPS52-217ENST00000478934 COTL1Q14019 142 aa8.02□□□□□ -1.12
VPS52-217ENST00000478934 SH2D6Q7Z4S9 175 aa8.02□□□□□ -1.12
VPS52-217ENST00000478934 Q8N1Y9 231 aa8.02□□□□□ -1.12
VPS52-217ENST00000478934 C20orf78Q9BR46 151 aa8.02□□□□□ -1.12
VPS52-217ENST00000478934 A0A0J9YX75 114 aa8.02□□□□□ -1.13
VPS52-217ENST00000478934 C11orf86A6NJI1 115 aa8.02□□□□□ -1.13
VPS52-217ENST00000478934 ZNF815PA8K554 130 aa8.02□□□□□ -1.13
VPS52-217ENST00000478934 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
VPS52-217ENST00000478934 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
VPS52-217ENST00000478934 TRBV7-3A0A075B6L6 115 aa8.01□□□□□ -1.13
VPS52-217ENST00000478934 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
VPS52-217ENST00000478934 HOXD3P31249 432 aaPredicted RBP8.01□□□□□ -1.13
VPS52-217ENST00000478934 KNCNA6PVL3 124 aa8.01□□□□□ -1.13
VPS52-217ENST00000478934 SLURP1P55000 103 aa8.01□□□□□ -1.13
VPS52-217ENST00000478934 IGHV3-64A0A075B6Q5 118 aa8□□□□□ -1.13
VPS52-217ENST00000478934 IGHV3-73A0A0B4J1V6 119 aa8□□□□□ -1.13
VPS52-217ENST00000478934 IGHV3-16A0A0C4DH30 117 aa8□□□□□ -1.13
VPS52-217ENST00000478934 E9PLD3 99 aa8□□□□□ -1.13
VPS52-217ENST00000478934 K7EQG2 157 aa8□□□□□ -1.13
VPS52-217ENST00000478934 NXPH4O95158 308 aa8□□□□□ -1.13
VPS52-217ENST00000478934 ZFP2Q6ZN57 461 aa8□□□□□ -1.13
VPS52-217ENST00000478934 ZNF702PQ9H963 129 aa8□□□□□ -1.13
VPS52-217ENST00000478934 PRRC2AP48634 2157 aaKnown RBP8□□□□□ -1.13
VPS52-217ENST00000478934 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
VPS52-217ENST00000478934 RBMY1A1P0DJD3 496 aaKnown RBP8□□□□□ -1.13
VPS52-217ENST00000478934 RBMY1CP0DJD4 496 aa8□□□□□ -1.13
VPS52-217ENST00000478934 RBMY1FQ15415 496 aaKnown RBP8□□□□□ -1.13
VPS52-217ENST00000478934 ETDBQ3ZM63 59 aa8□□□□□ -1.13
VPS52-217ENST00000478934 MORN3Q6PF18 240 aaPredicted RBP8□□□□□ -1.13
VPS52-217ENST00000478934 ITPR3Q14573 2671 aa8□□□□□ -1.13
VPS52-217ENST00000478934 IGLV4-69A0A075B6H9 119 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 MED14OSP0DP75 135 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 ZNF56Q15929 161 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 APOMO95445 188 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 IGHV4-31P0DP07 118 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 GATA3P23771 443 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 POLR2KP53803 58 aaKnown RBP7.99□□□□□ -1.13
VPS52-217ENST00000478934 TSPEAR-AS2P59090 65 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS52-217ENST00000478934 TMEM170BQ5T4T1 132 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 FOXI2Q6ZQN5 318 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 ZNF580Q9UK33 172 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 VPREB3Q9UKI3 123 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 INSL3P51460 131 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms