RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 CACNG7P62955 275 aa18.59■□□□□ 0.57
CCM2-211ENST00000478582 WDR73Q6P4I2 378 aa18.59■□□□□ 0.57
CCM2-211ENST00000478582 UQCC3Q6UW78 93 aa18.59■□□□□ 0.57
CCM2-211ENST00000478582 MUC21A0A0G2JKD1 596 aa18.58■□□□□ 0.56
CCM2-211ENST00000478582 MUC21A0A140T8X8 626 aa18.58■□□□□ 0.56
CCM2-211ENST00000478582 CTRLP40313 264 aa18.58■□□□□ 0.56
CCM2-211ENST00000478582 LYZL1Q6UWQ5 148 aa18.58■□□□□ 0.56
CCM2-211ENST00000478582 SLC25A29Q8N8R3 303 aa18.58■□□□□ 0.56
CCM2-211ENST00000478582 TPPP3Q9BW30 176 aa18.58■□□□□ 0.56
CCM2-211ENST00000478582 ADIRFQ15847 76 aa18.57■□□□□ 0.56
CCM2-211ENST00000478582 MRPL23Q16540 153 aaKnown RBP18.57■□□□□ 0.56
CCM2-211ENST00000478582 C15orf54Q8N8G6 183 aa18.57■□□□□ 0.56
CCM2-211ENST00000478582 GTSF1Q8WW33 167 aa18.57■□□□□ 0.56
CCM2-211ENST00000478582 GYPEP15421 78 aa18.56■□□□□ 0.56
CCM2-211ENST00000478582 FOXA3P55318 350 aaPredicted RBP18.56■□□□□ 0.56
CCM2-211ENST00000478582 RHOHQ15669 191 aa18.56■□□□□ 0.56
CCM2-211ENST00000478582 CNFNQ9BYD5 112 aa18.56■□□□□ 0.56
CCM2-211ENST00000478582 A0A087WWL8 130 aa18.55■□□□□ 0.56
CCM2-211ENST00000478582 K7EQD1 137 aa18.55■□□□□ 0.56
CCM2-211ENST00000478582 CCL18P55774 89 aa18.55■□□□□ 0.56
CCM2-211ENST00000478582 Q6ZSN1 163 aa18.55■□□□□ 0.56
CCM2-211ENST00000478582 PRADC1Q9BSG0 188 aa18.55■□□□□ 0.56
CCM2-211ENST00000478582 FAM3BP58499 235 aaPredicted RBP18.54■□□□□ 0.56
CCM2-211ENST00000478582 FAM74A4Q5TZK3 123 aa18.54■□□□□ 0.56
CCM2-211ENST00000478582 TSKUQ8WUA8 353 aa18.54■□□□□ 0.56
CCM2-211ENST00000478582 GFRA4Q9GZZ7 299 aa18.54■□□□□ 0.56
CCM2-211ENST00000478582 V9GYV3 84 aa18.54■□□□□ 0.56
CCM2-211ENST00000478582 LINC00862A6NCI5 91 aa18.53■□□□□ 0.56
CCM2-211ENST00000478582 FAM231BA6NCW3 169 aa18.53■□□□□ 0.56
CCM2-211ENST00000478582 UBE2DNLQ8IWF7 75 aa18.53■□□□□ 0.56
CCM2-211ENST00000478582 OR10G8Q8NGN5 311 aa18.53■□□□□ 0.56
CCM2-211ENST00000478582 NTF3P20783 257 aa18.52■□□□□ 0.56
CCM2-211ENST00000478582 SSTP61278 116 aa18.52■□□□□ 0.56
CCM2-211ENST00000478582 ESRGQ1W209 222 aa18.52■□□□□ 0.56
CCM2-211ENST00000478582 AP1S3Q96PC3 154 aa18.52■□□□□ 0.56
CCM2-211ENST00000478582 MSRB1Q9NZV6 116 aa18.52■□□□□ 0.56
CCM2-211ENST00000478582 KIF25-AS1Q9Y6Z4 181 aa18.52■□□□□ 0.56
CCM2-211ENST00000478582 LOC100131303A0A0U1RQF7 123 aa18.51■□□□□ 0.55
CCM2-211ENST00000478582 SRIP30626 198 aa18.51■□□□□ 0.55
CCM2-211ENST00000478582 NEGR1Q7Z3B1 354 aa18.51■□□□□ 0.55
CCM2-211ENST00000478582 C14orf178Q8N769 122 aaPredicted RBP18.51■□□□□ 0.55
CCM2-211ENST00000478582 LINC00588Q9Y4M8 146 aa18.51■□□□□ 0.55
CCM2-211ENST00000478582 DNAH6Q9C0G6 4158 aa18.5■□□□□ 0.55
CCM2-211ENST00000478582 SH2D6Q7Z4S9 175 aa18.5■□□□□ 0.55
CCM2-211ENST00000478582 BIRC6Q9NR09 4857 aa18.5■□□□□ 0.55
CCM2-211ENST00000478582 RAB4BP61018 213 aa18.49■□□□□ 0.55
CCM2-211ENST00000478582 PNRC1Q12796 327 aaPredicted RBP18.49■□□□□ 0.55
CCM2-211ENST00000478582 COMMD7Q86VX2 200 aa18.49■□□□□ 0.55
CCM2-211ENST00000478582 TMEM218A2RU14 115 aa18.48■□□□□ 0.55
CCM2-211ENST00000478582 TRGC1P0CF51 173 aa18.48■□□□□ 0.55
CCM2-211ENST00000478582 SMIM17P0DL12 118 aa18.48■□□□□ 0.55
CCM2-211ENST00000478582 LINC00315P59091 139 aa18.48■□□□□ 0.55
CCM2-211ENST00000478582 PGLYRP4Q96LB8 373 aa18.47■□□□□ 0.55
CCM2-211ENST00000478582 HIGD1CA8MV81 97 aa18.46■□□□□ 0.55
CCM2-211ENST00000478582 TWIST1Q15672 202 aa18.46■□□□□ 0.55
CCM2-211ENST00000478582 LYPD5Q6UWN5 251 aa18.46■□□□□ 0.55
CCM2-211ENST00000478582 UPK3BQ9BT76 320 aa18.46■□□□□ 0.55
CCM2-211ENST00000478582 MRPS16Q9Y3D3 137 aaKnown RBP18.46■□□□□ 0.55
CCM2-211ENST00000478582 ZNRF2Q8NHG8 242 aa18.45■□□□□ 0.54
CCM2-211ENST00000478582 DNAH10Q8IVF4 4471 aa18.45■□□□□ 0.54
CCM2-211ENST00000478582 TRBV10-1A0A0K0K1A3 114 aa18.44■□□□□ 0.54
CCM2-211ENST00000478582 LINC00694P0DN24 101 aa18.44■□□□□ 0.54
CCM2-211ENST00000478582 EVI2AP22794 236 aa18.44■□□□□ 0.54
CCM2-211ENST00000478582 ZNF56Q15929 161 aa18.44■□□□□ 0.54
CCM2-211ENST00000478582 SMIM27A0A1W2PRY6 76 aa18.43■□□□□ 0.54
CCM2-211ENST00000478582 TIRAPP58753 221 aa18.43■□□□□ 0.54
CCM2-211ENST00000478582 BORCS7Q96B45 105 aa18.43■□□□□ 0.54
CCM2-211ENST00000478582 DPH3P1Q9H4G8 78 aa18.43■□□□□ 0.54
CCM2-211ENST00000478582 Q9UF83 564 aa18.43■□□□□ 0.54
CCM2-211ENST00000478582 A0A1B0GUT8 65 aa18.42■□□□□ 0.54
CCM2-211ENST00000478582 ADCYAP1P18509 176 aa18.42■□□□□ 0.54
CCM2-211ENST00000478582 NAT8BQ9UHF3 227 aa18.42■□□□□ 0.54
CCM2-211ENST00000478582 FRAS1Q86XX4 4008 aa18.41■□□□□ 0.54
CCM2-211ENST00000478582 F5H697 171 aa18.41■□□□□ 0.54
CCM2-211ENST00000478582 F8W036 122 aa18.41■□□□□ 0.54
CCM2-211ENST00000478582 PPP1R2P9O14990 202 aa18.41■□□□□ 0.54
CCM2-211ENST00000478582 NUP35Q8NFH5 326 aa18.41■□□□□ 0.54
CCM2-211ENST00000478582 SEC11CQ9BY50 192 aa18.41■□□□□ 0.54
CCM2-211ENST00000478582 GAGE12JA6NER3 117 aa18.4■□□□□ 0.54
CCM2-211ENST00000478582 GAGE1Q13065 139 aa18.4■□□□□ 0.54
CCM2-211ENST00000478582 GAGE4Q13068 117 aa18.4■□□□□ 0.54
CCM2-211ENST00000478582 GAGE5Q13069 117 aa18.4■□□□□ 0.54
CCM2-211ENST00000478582 GAGE13Q4V321 117 aa18.4■□□□□ 0.54
CCM2-211ENST00000478582 ATP6V0E2Q8NHE4 81 aa18.4■□□□□ 0.54
CCM2-211ENST00000478582 MGPP08493 103 aa18.38■□□□□ 0.53
CCM2-211ENST00000478582 SMIM15Q7Z3B0 74 aa18.38■□□□□ 0.53
CCM2-211ENST00000478582 ANAPC16Q96DE5 110 aa18.38■□□□□ 0.53
CCM2-211ENST00000478582 Q9H8V8 135 aa18.38■□□□□ 0.53
CCM2-211ENST00000478582 MT-ND4LP03901 98 aa18.37■□□□□ 0.53
CCM2-211ENST00000478582 RPL36AP83881 106 aaKnown RBP18.37■□□□□ 0.53
CCM2-211ENST00000478582 RPL36ALQ969Q0 106 aaKnown RBP18.37■□□□□ 0.53
CCM2-211ENST00000478582 GTSF1LQ9H1H1 148 aa18.37■□□□□ 0.53
CCM2-211ENST00000478582 TRBV7-3A0A075B6L6 115 aa18.36■□□□□ 0.53
CCM2-211ENST00000478582 M0QY20 66 aa18.36■□□□□ 0.53
CCM2-211ENST00000478582 M0R2N4 97 aa18.36■□□□□ 0.53
CCM2-211ENST00000478582 C10orf91Q5T1B1 145 aa18.36■□□□□ 0.53
CCM2-211ENST00000478582 NEXN-AS1Q8NBZ9 246 aa18.36■□□□□ 0.53
CCM2-211ENST00000478582 H7C1H1 209 aa18.35■□□□□ 0.53
CCM2-211ENST00000478582 RIGQ13278 110 aa18.35■□□□□ 0.53
CCM2-211ENST00000478582 SUMO4Q6EEV6 95 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms