RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 A0A1W2PPV4 95 aa12.82□□□□□ -0.36
PDLIM1-202ENST00000477757 KRTAP26-1Q6PEX3 210 aa12.82□□□□□ -0.36
PDLIM1-202ENST00000477757 SCGB1C1Q8TD33 95 aa12.82□□□□□ -0.36
PDLIM1-202ENST00000477757 A0A087WWL8 130 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 ARL14EPLP0DKL9 152 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 CLRN3Q8NCR9 226 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 OR11H4Q8NGC9 324 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 SPACA4Q8TDM5 124 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 RBM38Q9H0Z9 239 aaKnown RBP12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 PRR34Q9NV39 138 aa12.81□□□□□ -0.36
PDLIM1-202ENST00000477757 PHOX2AO14813 284 aa12.8□□□□□ -0.36
PDLIM1-202ENST00000477757 HMGB3O15347 200 aaKnown RBP12.8□□□□□ -0.36
PDLIM1-202ENST00000477757 SIX6O95475 246 aa12.8□□□□□ -0.36
PDLIM1-202ENST00000477757 RAB2AP61019 212 aa12.8□□□□□ -0.36
PDLIM1-202ENST00000477757 SFRP2Q96HF1 295 aa12.8□□□□□ -0.36
PDLIM1-202ENST00000477757 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
PDLIM1-202ENST00000477757 PKIAP61925 76 aa12.79□□□□□ -0.36
PDLIM1-202ENST00000477757 DNLZQ5SXM8 178 aa12.79□□□□□ -0.36
PDLIM1-202ENST00000477757 OR10G8Q8NGN5 311 aa12.79□□□□□ -0.36
PDLIM1-202ENST00000477757 IGHV3-64A0A075B6Q5 118 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 A0A0J9YXV3 536 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 B4DEV8 164 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 ARMS2P0C7Q2 107 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 CHTF8P0CG12 524 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 SUN5Q8TC36 379 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 C7orf33Q8WU49 177 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 PLAC8Q9NZF1 115 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 KIF25-AS1Q9Y6Z4 181 aa12.78□□□□□ -0.36
PDLIM1-202ENST00000477757 FABP5P3A8MUU1 101 aa12.77□□□□□ -0.37
PDLIM1-202ENST00000477757 PTTG1O95997 202 aa12.77□□□□□ -0.37
PDLIM1-202ENST00000477757 WDR73Q6P4I2 378 aa12.77□□□□□ -0.37
PDLIM1-202ENST00000477757 CHCHD5Q9BSY4 110 aa12.77□□□□□ -0.37
PDLIM1-202ENST00000477757 SMIM3Q9BZL3 60 aa12.77□□□□□ -0.37
PDLIM1-202ENST00000477757 CLPSL2Q6UWE3 100 aa12.76□□□□□ -0.37
PDLIM1-202ENST00000477757 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
PDLIM1-202ENST00000477757 ARL2-SNX15V9GYD0 113 aa12.76□□□□□ -0.37
PDLIM1-202ENST00000477757 STAG3L2P0CL84 134 aa12.75□□□□□ -0.37
PDLIM1-202ENST00000477757 STAG3L3P0CL85 134 aa12.75□□□□□ -0.37
PDLIM1-202ENST00000477757 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
PDLIM1-202ENST00000477757 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
PDLIM1-202ENST00000477757 PHLDA3Q9Y5J5 127 aa12.75□□□□□ -0.37
PDLIM1-202ENST00000477757 hDV102S1A0JD36 115 aa12.74□□□□□ -0.37
PDLIM1-202ENST00000477757 KRBOX1C9JBD0 128 aa12.74□□□□□ -0.37
PDLIM1-202ENST00000477757 GCHFRP30047 84 aa12.74□□□□□ -0.37
PDLIM1-202ENST00000477757 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
PDLIM1-202ENST00000477757 KRTAP10-8P60410 259 aa12.74□□□□□ -0.37
PDLIM1-202ENST00000477757 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.73□□□□□ -0.37
PDLIM1-202ENST00000477757 M0R381 172 aa12.73□□□□□ -0.37
PDLIM1-202ENST00000477757 CYCSP99999 105 aaKnown RBP12.73□□□□□ -0.37
PDLIM1-202ENST00000477757 LINC00269Q8N2A0 174 aa12.73□□□□□ -0.37
PDLIM1-202ENST00000477757 NEXN-AS1Q8NBZ9 246 aa12.73□□□□□ -0.37
PDLIM1-202ENST00000477757 PPP1R1CQ8WVI7 109 aa12.73□□□□□ -0.37
PDLIM1-202ENST00000477757 LPAP08519 4548 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 FAM240BA0A1B0GVZ2 78 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 GRIFINA4D1Z8 144 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 M0R036 132 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 RBX1P62877 108 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 ZFP82Q8N141 532 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 WFDC1Q9HC57 220 aa12.72□□□□□ -0.37
PDLIM1-202ENST00000477757 SLPIP03973 132 aa12.71□□□□□ -0.37
PDLIM1-202ENST00000477757 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.37
PDLIM1-202ENST00000477757 RPL12P30050 165 aaKnown RBP12.71□□□□□ -0.37
PDLIM1-202ENST00000477757 Q86TA4 180 aa12.71□□□□□ -0.37
PDLIM1-202ENST00000477757 AP5S1Q9NUS5 200 aa12.71□□□□□ -0.37
PDLIM1-202ENST00000477757 PET100P0DJ07 73 aa12.7□□□□□ -0.38
PDLIM1-202ENST00000477757 H2BFSP57053 126 aa12.7□□□□□ -0.38
PDLIM1-202ENST00000477757 PRR27Q6MZM9 219 aa12.7□□□□□ -0.38
PDLIM1-202ENST00000477757 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-202ENST00000477757 RAB24Q969Q5 203 aa12.7□□□□□ -0.38
PDLIM1-202ENST00000477757 MPC2O95563 127 aa12.69□□□□□ -0.38
PDLIM1-202ENST00000477757 CRIP1P50238 77 aa12.69□□□□□ -0.38
PDLIM1-202ENST00000477757 RAB4BP61018 213 aa12.69□□□□□ -0.38
PDLIM1-202ENST00000477757 NTM-AS1Q6ZSK4 140 aa12.69□□□□□ -0.38
PDLIM1-202ENST00000477757 TMEM167BQ9NRX6 74 aa12.69□□□□□ -0.38
PDLIM1-202ENST00000477757 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
PDLIM1-202ENST00000477757 SH2D1AO60880 128 aa12.68□□□□□ -0.38
PDLIM1-202ENST00000477757 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
PDLIM1-202ENST00000477757 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
PDLIM1-202ENST00000477757 REG3AQ06141 175 aa12.67□□□□□ -0.38
PDLIM1-202ENST00000477757 GAGE6Q13070 117 aa12.67□□□□□ -0.38
PDLIM1-202ENST00000477757 ZNF56Q15929 161 aa12.67□□□□□ -0.38
PDLIM1-202ENST00000477757 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
PDLIM1-202ENST00000477757 VAX2Q9UIW0 290 aa12.67□□□□□ -0.38
PDLIM1-202ENST00000477757 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
PDLIM1-202ENST00000477757 SPINK6Q6UWN8 80 aa12.66□□□□□ -0.38
PDLIM1-202ENST00000477757 COX8CQ7Z4L0 72 aa12.66□□□□□ -0.38
PDLIM1-202ENST00000477757 CCDC32Q9BV29 185 aa12.66□□□□□ -0.38
PDLIM1-202ENST00000477757 KRTAP9-2Q9BYQ4 174 aa12.66□□□□□ -0.38
PDLIM1-202ENST00000477757 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
PDLIM1-202ENST00000477757 CXorf1O96002 111 aa12.65□□□□□ -0.38
PDLIM1-202ENST00000477757 LINC01559Q495D7 138 aa12.65□□□□□ -0.38
PDLIM1-202ENST00000477757 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.38
PDLIM1-202ENST00000477757 TRBV25-1A0A075B6N4 114 aa12.64□□□□□ -0.39
PDLIM1-202ENST00000477757 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
PDLIM1-202ENST00000477757 TRAV8-4A0A0B4J246 113 aa12.64□□□□□ -0.39
PDLIM1-202ENST00000477757 PEX7O00628 323 aa12.64□□□□□ -0.39
PDLIM1-202ENST00000477757 P01737 135 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms