RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 RPL35P42766 123 aaKnown RBP14.67□□□□□ -0.06
COL9A3-211ENST00000477612 SSBP4Q9BWG4 385 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-211ENST00000477612 Q9UF83 564 aa14.67□□□□□ -0.06
COL9A3-211ENST00000477612 OR10J3Q5JRS4 329 aa14.66□□□□□ -0.06
COL9A3-211ENST00000477612 C14orf178Q8N769 122 aaPredicted RBP14.66□□□□□ -0.06
COL9A3-211ENST00000477612 GAGE12JA6NER3 117 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 IBA57-AS1B1ANH7 110 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 M0R381 172 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 SNAI2O43623 268 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 ERVFC1-1P60608 527 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 RPL19P84098 196 aaKnown RBP14.65□□□□□ -0.06
COL9A3-211ENST00000477612 GAGE1Q13065 139 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 GAGE4Q13068 117 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 GAGE5Q13069 117 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 GAGE13Q4V321 117 aa14.65□□□□□ -0.06
COL9A3-211ENST00000477612 DERL1Q9BUN8 251 aa14.64□□□□□ -0.07
COL9A3-211ENST00000477612 KRTAP17-1Q9BYP8 105 aa14.64□□□□□ -0.07
COL9A3-211ENST00000477612 PGPEP1Q9NXJ5 209 aa14.64□□□□□ -0.07
COL9A3-211ENST00000477612 EREGO14944 169 aa14.63□□□□□ -0.07
COL9A3-211ENST00000477612 OR5AL1P0C617 328 aa14.63□□□□□ -0.07
COL9A3-211ENST00000477612 FAM74A4Q5TZK3 123 aa14.63□□□□□ -0.07
COL9A3-211ENST00000477612 A0A087WTM6 91 aa14.62□□□□□ -0.07
COL9A3-211ENST00000477612 A0A087WWL8 130 aa14.62□□□□□ -0.07
COL9A3-211ENST00000477612 IGLV2-8P01709 118 aa14.62□□□□□ -0.07
COL9A3-211ENST00000477612 MEF2BQ02080 365 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-211ENST00000477612 SMIM12Q96EX1 92 aa14.62□□□□□ -0.07
COL9A3-211ENST00000477612 PCLOQ9Y6V0 5065 aa14.62□□□□□ -0.07
COL9A3-211ENST00000477612 A0A087WWC5 75 aa14.61□□□□□ -0.07
COL9A3-211ENST00000477612 TRBV10-1A0A0K0K1A3 114 aa14.61□□□□□ -0.07
COL9A3-211ENST00000477612 PRR27Q6MZM9 219 aa14.61□□□□□ -0.07
COL9A3-211ENST00000477612 AKAP14Q86UN6 197 aa14.61□□□□□ -0.07
COL9A3-211ENST00000477612 OR10AG1Q8NH19 301 aa14.61□□□□□ -0.07
COL9A3-211ENST00000477612 PDE6DO43924 150 aa14.6□□□□□ -0.07
COL9A3-211ENST00000477612 CDPF1Q6NVV7 123 aa14.6□□□□□ -0.07
COL9A3-211ENST00000477612 C9orf62Q8N4C0 152 aa14.6□□□□□ -0.07
COL9A3-211ENST00000477612 IFNA1P01562 189 aa14.59□□□□□ -0.07
COL9A3-211ENST00000477612 LAGE3Q14657 143 aa14.59□□□□□ -0.07
COL9A3-211ENST00000477612 CENPWQ5EE01 88 aa14.59□□□□□ -0.07
COL9A3-211ENST00000477612 C19orf71A6NCJ1 209 aa14.58□□□□□ -0.08
COL9A3-211ENST00000477612 BCL2P10415 239 aa14.58□□□□□ -0.08
COL9A3-211ENST00000477612 RAB4BP61018 213 aa14.58□□□□□ -0.08
COL9A3-211ENST00000477612 OR10G8Q8NGN5 311 aa14.58□□□□□ -0.08
COL9A3-211ENST00000477612 IGHV3-30P01768 117 aa14.57□□□□□ -0.08
COL9A3-211ENST00000477612 IGHV3-33P01772 117 aa14.57□□□□□ -0.08
COL9A3-211ENST00000477612 IGHV3-30-3P0DP02 117 aa14.57□□□□□ -0.08
COL9A3-211ENST00000477612 IGHV3-30-5P0DP03 117 aa14.57□□□□□ -0.08
COL9A3-211ENST00000477612 TAGLN2P37802 199 aaKnown RBP14.57□□□□□ -0.08
COL9A3-211ENST00000477612 VAX2Q9UIW0 290 aa14.57□□□□□ -0.08
COL9A3-211ENST00000477612 RAB19A4D1S5 217 aa14.56□□□□□ -0.08
COL9A3-211ENST00000477612 TRBV20OR9-2A0A075B6H5 130 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 TRBV7-3A0A075B6L6 115 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 LRCOL1A6NCL2 159 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 IGLC6P0CF74 106 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 GNG4P50150 75 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 UBE2D3P61077 147 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 UBE2D2P62837 147 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 RPL36AP83881 106 aaKnown RBP14.55□□□□□ -0.08
COL9A3-211ENST00000477612 SPANXN1Q5VSR9 72 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 RPL36ALQ969Q0 106 aaKnown RBP14.55□□□□□ -0.08
COL9A3-211ENST00000477612 MED9Q9NWA0 146 aa14.55□□□□□ -0.08
COL9A3-211ENST00000477612 RPS20P60866 119 aaKnown RBP14.54□□□□□ -0.08
COL9A3-211ENST00000477612 DAZAP1Q96EP5 407 aaKnown RBP14.54□□□□□ -0.08
COL9A3-211ENST00000477612 KIF25-AS1Q9Y6Z4 181 aa14.54□□□□□ -0.08
COL9A3-211ENST00000477612 ABCA13Q86UQ4 5058 aa14.53□□□□□ -0.08
COL9A3-211ENST00000477612 hCG_2014768A0A024R1R8 64 aa14.53□□□□□ -0.08
COL9A3-211ENST00000477612 Q8N3U1 123 aa14.53□□□□□ -0.08
COL9A3-211ENST00000477612 PSCAO43653 123 aa14.52□□□□□ -0.09
COL9A3-211ENST00000477612 NIT1Q86X76 327 aa14.52□□□□□ -0.09
COL9A3-211ENST00000477612 LYPD6BQ8NI32 183 aa14.52□□□□□ -0.09
COL9A3-211ENST00000477612 KRTAP4-5Q9BYR2 181 aa14.52□□□□□ -0.09
COL9A3-211ENST00000477612 BIN3Q9NQY0 253 aa14.52□□□□□ -0.09
COL9A3-211ENST00000477612 MUC21A0A0G2JKD1 596 aa14.51□□□□□ -0.09
COL9A3-211ENST00000477612 MUC21A0A140T8X8 626 aa14.51□□□□□ -0.09
COL9A3-211ENST00000477612 ZNF56Q15929 161 aa14.51□□□□□ -0.09
COL9A3-211ENST00000477612 DAZ4Q86SG3 579 aaKnown RBP14.51□□□□□ -0.09
COL9A3-211ENST00000477612 NEXN-AS1Q8NBZ9 246 aa14.51□□□□□ -0.09
COL9A3-211ENST00000477612 OR2D3Q8NGH3 330 aa14.51□□□□□ -0.09
COL9A3-211ENST00000477612 Q9HAA7 133 aa14.51□□□□□ -0.09
COL9A3-211ENST00000477612 DAZ3Q9NR90 486 aaKnown RBP14.51□□□□□ -0.09
COL9A3-211ENST00000477612 TRAV8-3A0A0A6YYJ7 113 aa14.5□□□□□ -0.09
COL9A3-211ENST00000477612 FUSP35637 526 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL9A3-211ENST00000477612 BLOC1S1P78537 153 aa14.5□□□□□ -0.09
COL9A3-211ENST00000477612 TOR2AQ5JU69 321 aa14.5□□□□□ -0.09
COL9A3-211ENST00000477612 FER1L6-AS1Q8NA97 138 aa14.5□□□□□ -0.09
COL9A3-211ENST00000477612 CHCHD7Q9BUK0 85 aa14.5□□□□□ -0.09
COL9A3-211ENST00000477612 TM2D2Q9BX73 214 aa14.5□□□□□ -0.09
COL9A3-211ENST00000477612 GZMBP10144 247 aa14.49□□□□□ -0.09
COL9A3-211ENST00000477612 MAPKAPK5-AS1Q8N8E1 139 aa14.49□□□□□ -0.09
COL9A3-211ENST00000477612 AP1S3Q96PC3 154 aa14.49□□□□□ -0.09
COL9A3-211ENST00000477612 XKRY2A2RUG3 117 aa14.48□□□□□ -0.09
COL9A3-211ENST00000477612 F2Z2F3 143 aa14.48□□□□□ -0.09
COL9A3-211ENST00000477612 P01737 135 aa14.48□□□□□ -0.09
COL9A3-211ENST00000477612 CACNG7P62955 275 aa14.48□□□□□ -0.09
COL9A3-211ENST00000477612 ALKAL2Q6UX46 152 aa14.48□□□□□ -0.09
COL9A3-211ENST00000477612 Q8N1X5 172 aa14.48□□□□□ -0.09
COL9A3-211ENST00000477612 RBFOX3A6NFN3 312 aa14.47□□□□□ -0.09
COL9A3-211ENST00000477612 NTN5Q8WTR8 489 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-211ENST00000477612 TRBV6-8A0A0A6YYG3 113 aa14.46□□□□□ -0.09
COL9A3-211ENST00000477612 SMIM17P0DL12 118 aa14.46□□□□□ -0.09
COL9A3-211ENST00000477612 Q8N814 137 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms