RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 OR5V1Q9UGF6 321 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 SCP2D1Q9UJQ7 156 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 NOP16Q9Y3C1 178 aaKnown RBP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 CHD3Q12873 2000 aaKnown RBP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 TRPM6Q9BX84 2022 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.1
HMGN4-202ENST00000477243 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.1
HMGN4-202ENST00000477243 KIF26BQ2KJY2 2108 aa1.9□□□□□ -2.1
HMGN4-202ENST00000477243 DLG5Q8TDM6 1919 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 TRBV20-1A0A075B6N2 111 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 TRAV12-2A0A075B6T6 113 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 A0A096LNJ9 63 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SLPIP03973 132 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SLC25A5P05141 298 aaKnown RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 CISD3P0C7P0 127 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SAA1P0DJI8 122 aaPredicted RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 NANOS3P60323 173 aaKnown RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SNRPD3P62318 126 aaKnown RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SNX29P2Q8IUI4 249 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 RAB37Q96AX2 223 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 RNF5Q99942 180 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SNHG12Q9BXW3 62 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 SLC35B3Q9H1N7 401 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 ASF1BQ9NVP2 202 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 METTL1Q9UBP6 276 aaKnown RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF407Q9C0G0 2248 aa1.9□□□□□ -2.11
HMGN4-202ENST00000477243 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
HMGN4-202ENST00000477243 LCTP09848 1927 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 NACAE9PAV3 2078 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 DOCK9Q9BZ29 2069 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 IGKV1OR2-108A0A075B7D4 117 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 IGHV3-15A0A0B4J1V0 119 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 IGKV3D-20A0A0C4DH25 116 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 LOC107986453A0A1B0GWG9 222 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 A0A1W2PQD3 144 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 OR51F1A6NGY5 319 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 H3BPC8 53 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 H3BQ85 93 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 LYRM1O43325 122 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 SYNGR2O43760 224 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 IGHV3-53P01767 116 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 IL4P05112 153 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF705BP0CI00 300 aaPredicted RBP1.89□□□□□ -2.11
HMGN4-202ENST00000477243 FABP4P15090 132 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF19P17023 458 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 FXYD2P54710 66 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 S100A10P60903 97 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 DYNLT1P63172 113 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF117Q03924 483 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF90Q03938 601 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 EBI3Q14213 229 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ASB16-AS1Q495Z4 193 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 PABPC1L2AQ5JQF8 200 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 MRPL54Q6P161 138 aaKnown RBP1.89□□□□□ -2.11
HMGN4-202ENST00000477243 SOSTDC1Q6X4U4 206 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 C2orf91Q6ZV80 131 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 SVBPQ8N300 66 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 C9orf62Q8N4C0 152 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 TTC9CQ8N5M4 171 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 LINC00311Q8N616 119 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 FAM216BQ8N7L0 139 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 CYB561D1Q8N8Q1 229 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 WFDC11Q8NEX6 87 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 MRPS24Q96EL2 167 aaKnown RBP1.89□□□□□ -2.11
HMGN4-202ENST00000477243 DPH3Q96FX2 82 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 ZC2HC1AQ96GY0 325 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 GOLGA2P5Q9HBQ8 144 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 TAS2R4Q9NYW5 299 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 AP4S1Q9Y587 144 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 TIMM9Q9Y5J7 89 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 CHCHD2Q9Y6H1 151 aaPredicted RBP1.89□□□□□ -2.11
HMGN4-202ENST00000477243 U3KQK5 164 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 WNK2Q9Y3S1 2297 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 TCHHQ07283 1943 aa1.89□□□□□ -2.11
HMGN4-202ENST00000477243 C19orf71A6NCJ1 209 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 A8MUU9 505 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CCDC179H3BU77 68 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 APOC4-APOC2K7ER74 178 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 TIMM17BO60830 172 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 HYPMO75409 117 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 APOC2P02655 101 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CD2P06729 351 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CD14P08571 375 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 GZMBP10144 247 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 IFITM1P13164 125 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 BRS3P32247 399 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 ETV6P41212 452 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 RPL28P46779 137 aaKnown RBP1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CATR1Q13166 79 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CDK5R1Q15078 307 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 DEFB109BQ30KR1 87 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 Q56UQ5 140 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CLLU1Q5K131 121 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 Q5W150 140 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF660Q6AZW8 331 aaPredicted RBP1.88□□□□□ -2.11
HMGN4-202ENST00000477243 LYZL1Q6UWQ5 148 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 PATE2Q6UY27 113 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms