RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 X6R8D5 127 aa20.77■□□□□ 0.91
VEGFA-211ENST00000476772 TRAV26-2A0A0B4J265 109 aa20.76■□□□□ 0.91
VEGFA-211ENST00000476772 UBE2CO00762 179 aa20.76■□□□□ 0.91
VEGFA-211ENST00000476772 LINC00315P59091 139 aa20.76■□□□□ 0.91
VEGFA-211ENST00000476772 BAGE3Q86Y29 109 aa20.76■□□□□ 0.91
VEGFA-211ENST00000476772 PIK3CD-AS1Q5SR53 167 aa20.75■□□□□ 0.91
VEGFA-211ENST00000476772 CRYGDP07320 174 aa20.74■□□□□ 0.91
VEGFA-211ENST00000476772 FAM74A4Q5TZK3 123 aa20.74■□□□□ 0.91
VEGFA-211ENST00000476772 LOC105371267A0A1B0GV96 52 aa20.73■□□□□ 0.91
VEGFA-211ENST00000476772 PPBPP02775 128 aa20.73■□□□□ 0.91
VEGFA-211ENST00000476772 GATA1P15976 413 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-211ENST00000476772 HOXA5P20719 270 aa20.73■□□□□ 0.91
VEGFA-211ENST00000476772 LINC00310P59036 64 aa20.73■□□□□ 0.91
VEGFA-211ENST00000476772 POM121L12Q8N7R1 296 aa20.73■□□□□ 0.91
VEGFA-211ENST00000476772 NOP10Q9NPE3 64 aaKnown RBP20.73■□□□□ 0.91
VEGFA-211ENST00000476772 NPYP01303 97 aa20.72■□□□□ 0.91
VEGFA-211ENST00000476772 DAZ2Q13117 558 aaKnown RBP20.72■□□□□ 0.91
VEGFA-211ENST00000476772 RASL10AQ92737 203 aa20.72■□□□□ 0.91
VEGFA-211ENST00000476772 MRAP2Q96G30 205 aa20.72■□□□□ 0.91
VEGFA-211ENST00000476772 TRGV1A0A0A0MS02 117 aa20.71■□□□□ 0.91
VEGFA-211ENST00000476772 SERF1AO75920 110 aa20.71■□□□□ 0.91
VEGFA-211ENST00000476772 PDZD11Q5EBL8 140 aa20.71■□□□□ 0.91
VEGFA-211ENST00000476772 SMIM9A6NGZ8 99 aa20.7■□□□□ 0.91
VEGFA-211ENST00000476772 A8MWV9 139 aa20.7■□□□□ 0.91
VEGFA-211ENST00000476772 NUPR1O60356 82 aa20.7■□□□□ 0.91
VEGFA-211ENST00000476772 Q6ZWC4 215 aa20.7■□□□□ 0.91
VEGFA-211ENST00000476772 PRB2P02812 416 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-211ENST00000476772 Q6ZTI0 123 aa20.7■□□□□ 0.9
VEGFA-211ENST00000476772 KPRPQ5T749 579 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-211ENST00000476772 HIST3H2BBQ8N257 126 aa20.69■□□□□ 0.9
VEGFA-211ENST00000476772 OR11H2Q8NH07 326 aa20.69■□□□□ 0.9
VEGFA-211ENST00000476772 CFAP126Q5VTH2 177 aa20.68■□□□□ 0.9
VEGFA-211ENST00000476772 RNF183Q96D59 192 aa20.68■□□□□ 0.9
VEGFA-211ENST00000476772 NDUFAF3Q9BU61 184 aa20.68■□□□□ 0.9
VEGFA-211ENST00000476772 F5H697 171 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 TNFRSF6BO95407 300 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 EMP1P54849 157 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 ZNF56Q15929 161 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 LGALS9BQ3B8N2 356 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 SUMO4Q6EEV6 95 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 NRACQ8N912 160 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 OVOL2Q9BRP0 275 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 LAMTOR2Q9Y2Q5 125 aa20.67■□□□□ 0.9
VEGFA-211ENST00000476772 NACAE9PAV3 2078 aa20.66■□□□□ 0.9
VEGFA-211ENST00000476772 RS1O15537 224 aa20.66■□□□□ 0.9
VEGFA-211ENST00000476772 UFSP1Q6NVU6 142 aa20.66■□□□□ 0.9
VEGFA-211ENST00000476772 URB1-AS1Q96HZ7 61 aa20.66■□□□□ 0.9
VEGFA-211ENST00000476772 IGHV3-73A0A0B4J1V6 119 aa20.65■□□□□ 0.9
VEGFA-211ENST00000476772 LOC389332A0A1B0GUA5 103 aa20.65■□□□□ 0.9
VEGFA-211ENST00000476772 NIT1Q86X76 327 aa20.64■□□□□ 0.9
VEGFA-211ENST00000476772 RPL39LQ96EH5 51 aaKnown RBP20.64■□□□□ 0.9
VEGFA-211ENST00000476772 IFITM10A6NMD0 228 aa20.64■□□□□ 0.89
VEGFA-211ENST00000476772 RNASEKQ6P5S7 137 aaKnown RBP20.64■□□□□ 0.89
VEGFA-211ENST00000476772 ESDP10768 282 aa20.63■□□□□ 0.89
VEGFA-211ENST00000476772 MAP1LC3AQ9H492 121 aa20.63■□□□□ 0.89
VEGFA-211ENST00000476772 NOTCH1P46531 2555 aa20.62■□□□□ 0.89
VEGFA-211ENST00000476772 GAGE12BA1L429 117 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 K7EIL1 84 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 GAGE7O76087 117 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 GAGE12FP0CL80 117 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 GAGE12GP0CL81 117 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 GAGE12IP0CL82 117 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 S100A2P29034 98 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 IFI27P40305 119 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-211ENST00000476772 IGHV4-28A0A0C4DH34 117 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 RHODO00212 210 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 OR4C5Q8NGB2 326 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 PRSS3P2Q8NHM4 247 aa20.61■□□□□ 0.89
VEGFA-211ENST00000476772 LINC00614P0C842 121 aa20.6■□□□□ 0.89
VEGFA-211ENST00000476772 MIFP14174 115 aa20.6■□□□□ 0.89
VEGFA-211ENST00000476772 Q8NAQ8 132 aa20.6■□□□□ 0.89
VEGFA-211ENST00000476772 MGAM2Q2M2H8 2515 aa20.59■□□□□ 0.89
VEGFA-211ENST00000476772 TRAV4A0A0B4J268 109 aa20.58■□□□□ 0.89
VEGFA-211ENST00000476772 M0QY20 66 aa20.58■□□□□ 0.89
VEGFA-211ENST00000476772 DEFB4AO15263 64 aa20.58■□□□□ 0.89
VEGFA-211ENST00000476772 ZNF479Q96JC4 524 aa20.58■□□□□ 0.89
VEGFA-211ENST00000476772 RETNQ9HD89 108 aa20.58■□□□□ 0.89
VEGFA-211ENST00000476772 KRTAP21-3Q3LHN1 58 aa20.58■□□□□ 0.88
VEGFA-211ENST00000476772 ZFP2Q6ZN57 461 aa20.58■□□□□ 0.88
VEGFA-211ENST00000476772 NBEAL2Q6ZNJ1 2754 aa20.58■□□□□ 0.88
VEGFA-211ENST00000476772 CHCHD1Q96BP2 118 aaKnown RBP20.58■□□□□ 0.88
VEGFA-211ENST00000476772 HIST1H2BLQ99880 126 aa20.58■□□□□ 0.88
VEGFA-211ENST00000476772 TP53TG1Q9Y2A0 90 aa20.58■□□□□ 0.88
VEGFA-211ENST00000476772 TRGV2A0A075B6R0 118 aa20.57■□□□□ 0.88
VEGFA-211ENST00000476772 IGHV3-53P01767 116 aa20.57■□□□□ 0.88
VEGFA-211ENST00000476772 FABP4P15090 132 aa20.57■□□□□ 0.88
VEGFA-211ENST00000476772 Q6ZSN1 163 aa20.57■□□□□ 0.88
VEGFA-211ENST00000476772 FA2HQ7L5A8 372 aa20.57■□□□□ 0.88
VEGFA-211ENST00000476772 HSBP1O75506 76 aa20.56■□□□□ 0.88
VEGFA-211ENST00000476772 PPP1R17O96001 155 aa20.56■□□□□ 0.88
VEGFA-211ENST00000476772 PRSS47A8MTI9 375 aa20.55■□□□□ 0.88
VEGFA-211ENST00000476772 PMCHP20382 165 aa20.55■□□□□ 0.88
VEGFA-211ENST00000476772 SUMO2P61956 95 aaKnown RBP20.55■□□□□ 0.88
VEGFA-211ENST00000476772 NBEAL1Q6ZS30 2694 aa20.55■□□□□ 0.88
VEGFA-211ENST00000476772 FAM19A2Q8N3H0 131 aa20.54■□□□□ 0.88
VEGFA-211ENST00000476772 LINC00612Q8N6U2 182 aa20.54■□□□□ 0.88
VEGFA-211ENST00000476772 C20orf78Q9BR46 151 aa20.54■□□□□ 0.88
VEGFA-211ENST00000476772 EDA2RQ9HAV5 297 aa20.54■□□□□ 0.88
VEGFA-211ENST00000476772 FAM222AQ5U5X8 452 aa20.54■□□□□ 0.88
VEGFA-211ENST00000476772 TMEM18Q96B42 140 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms