RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LINC01356Q8N9X3 169 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 PROK2Q9HC23 129 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 HIVEP2P31629 2446 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 IGHV4-28A0A0C4DH34 117 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 ADAMTS20P59510 1910 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 FXYD2P54710 66 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 PRUNE2Q8WUY3 3088 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 C17orf82Q86X59 251 aaPredicted RBP9.07□□□□□ -0.96
U2AF1-209ENST00000475639 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 LINC01619G3V211 115 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 FAM167A-AS1Q96KT0 104 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 Q9H8V8 135 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 SPRR3Q9UBC9 169 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 BPESC1Q9GZL8 116 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 IGKV1-16P04430 117 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 GATA4P43694 442 aa9.07□□□□□ -0.96
U2AF1-209ENST00000475639 PRR14LQ5THK1 2151 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 H3BQ85 93 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 XCL1P47992 114 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 HIVEP3Q5T1R4 2406 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 CEP192Q8TEP8 1941 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 GGNQ86UU5 652 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 GAFA1Q96PS6 74 aa9.06□□□□□ -0.96
U2AF1-209ENST00000475639 A0A096LNJ9 63 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 MBD3L4A6NDZ8 208 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-209ENST00000475639 MBD3L3A6NE82 208 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-209ENST00000475639 MBD3L5A6NJ08 208 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-209ENST00000475639 K7EMI3 77 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 ZNF493Q6ZR52 646 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 C8orf86Q6ZUL3 223 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 MBD3L2Q8NHZ7 208 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-209ENST00000475639 UBE2E1P51965 193 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 NDUFA4O00483 81 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 MSMBP08118 114 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 DYNAPQ8N1N2 210 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 TANC2Q9HCD6 1990 aa9.05□□□□□ -0.96
U2AF1-209ENST00000475639 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 IGLV3-19P01714 112 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 CAMK2N2Q96S95 79 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 ZMAT4Q9H898 229 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 B3GALT5-AS1P59052 145 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 LOXL1Q08397 574 aaPredicted RBP9.04□□□□□ -0.96
U2AF1-209ENST00000475639 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 IGKV1D-17A0A075B6S4 117 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 RNF183Q96D59 192 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 Q9HAA7 133 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 A0A096LPF7 62 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
U2AF1-209ENST00000475639 TRAV12-2A0A075B6T6 113 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 IGHV4-4A0A075B6R2 117 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 NDUFS7O75251 213 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
U2AF1-209ENST00000475639 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
U2AF1-209ENST00000475639 E9PLD3 99 aa9.02□□□□□ -0.96
U2AF1-209ENST00000475639 LTAP01374 205 aa9.02□□□□□ -0.96
U2AF1-209ENST00000475639 CDIP1Q9H305 208 aa9.02□□□□□ -0.96
U2AF1-209ENST00000475639 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 PINLYPA6NC86 204 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 PRO0461Q9UI25 63 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 TTTY13Q9BZ97 58 aa9.02□□□□□ -0.97
U2AF1-209ENST00000475639 G3V318 75 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 MT-ATP8P03928 68 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 TMEM14BQ9NUH8 114 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 MYO9AB2RTY4 2548 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 TIRAPP58753 221 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
U2AF1-209ENST00000475639 LYPD2Q6UXB3 125 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 TMEM14CQ9P0S9 112 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 DKK2Q9UBU2 259 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 TNFRSF13BO14836 293 aaPredicted RBP9.01□□□□□ -0.97
U2AF1-209ENST00000475639 NDUFA4L2Q9NRX3 87 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 LY6HO94772 140 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 MYCNOSP40205 109 aa9.01□□□□□ -0.97
U2AF1-209ENST00000475639 K7EM74 188 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 IGHV1-69P01742 117 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 PRRC2AP48634 2157 aaKnown RBP9□□□□□ -0.97
U2AF1-209ENST00000475639 ABCA2Q9BZC7 2435 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 FHL3Q13643 280 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 FXYD5Q96DB9 178 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 IGKV2D-26A0A0A0MRZ7 120 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 RNF223E7ERA6 249 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms