RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TRAV8-6A0A0B4J262 113 aa16.33■□□□□ 0.2
CPNE1-223ENST00000475146 OR10J3Q5JRS4 329 aa16.33■□□□□ 0.2
CPNE1-223ENST00000475146 OR10AG1Q8NH19 301 aa16.33■□□□□ 0.2
CPNE1-223ENST00000475146 DAZAP1Q96EP5 407 aaKnown RBP16.33■□□□□ 0.2
CPNE1-223ENST00000475146 BLOC1S1P78537 153 aa16.32■□□□□ 0.2
CPNE1-223ENST00000475146 GTSF1LQ9H1H1 148 aa16.32■□□□□ 0.2
CPNE1-223ENST00000475146 IGHV3-38A0A0C4DH36 116 aa16.31■□□□□ 0.2
CPNE1-223ENST00000475146 IGLV2-8P01709 118 aa16.31■□□□□ 0.2
CPNE1-223ENST00000475146 CRYGDP07320 174 aa16.31■□□□□ 0.2
CPNE1-223ENST00000475146 LELP1Q5T871 98 aa16.31■□□□□ 0.2
CPNE1-223ENST00000475146 SMIM12Q96EX1 92 aa16.31■□□□□ 0.2
CPNE1-223ENST00000475146 TNFRSF18Q9Y5U5 241 aa16.31■□□□□ 0.2
CPNE1-223ENST00000475146 MUC21A0A0G2JKD1 596 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 MUC21A0A140T8X8 626 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 K7EP13 123 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 SNAI2O43623 268 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 LINC00694P0DN24 101 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 SPANXN1Q5VSR9 72 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 Q9UF83 564 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 BOLA1Q9Y3E2 137 aa16.3■□□□□ 0.2
CPNE1-223ENST00000475146 OR5AL1P0C617 328 aa16.29■□□□□ 0.2
CPNE1-223ENST00000475146 SSTP61278 116 aa16.29■□□□□ 0.2
CPNE1-223ENST00000475146 Q6ZRN7 208 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-223ENST00000475146 NFE4Q86UQ8 179 aa16.29■□□□□ 0.2
CPNE1-223ENST00000475146 C10orf126Q8N4M7 172 aa16.29■□□□□ 0.2
CPNE1-223ENST00000475146 OR2D3Q8NGH3 330 aa16.29■□□□□ 0.2
CPNE1-223ENST00000475146 MSRB1Q9NZV6 116 aa16.29■□□□□ 0.2
CPNE1-223ENST00000475146 TRBV20OR9-2A0A075B6H5 130 aa16.28■□□□□ 0.2
CPNE1-223ENST00000475146 SSBP4Q9BWG4 385 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-223ENST00000475146 C16orf90A8MZG2 172 aa16.27■□□□□ 0.2
CPNE1-223ENST00000475146 GZMBP10144 247 aa16.27■□□□□ 0.2
CPNE1-223ENST00000475146 RPS20P60866 119 aaKnown RBP16.27■□□□□ 0.2
CPNE1-223ENST00000475146 LINC01556Q5JQF7 62 aa16.27■□□□□ 0.2
CPNE1-223ENST00000475146 TPPP3Q9BW30 176 aa16.27■□□□□ 0.2
CPNE1-223ENST00000475146 BIN3Q9NQY0 253 aa16.27■□□□□ 0.2
CPNE1-223ENST00000475146 C19orf71A6NCJ1 209 aa16.26■□□□□ 0.19
CPNE1-223ENST00000475146 P01737 135 aa16.26■□□□□ 0.19
CPNE1-223ENST00000475146 ZNF56Q15929 161 aa16.26■□□□□ 0.19
CPNE1-223ENST00000475146 SPATA12Q7Z6I5 190 aa16.26■□□□□ 0.19
CPNE1-223ENST00000475146 RBFOX3A6NFN3 312 aa16.24■□□□□ 0.19
CPNE1-223ENST00000475146 IGHV3-30P01768 117 aa16.24■□□□□ 0.19
CPNE1-223ENST00000475146 IGHV3-33P01772 117 aa16.24■□□□□ 0.19
CPNE1-223ENST00000475146 IGHV3-30-3P0DP02 117 aa16.24■□□□□ 0.19
CPNE1-223ENST00000475146 IGHV3-30-5P0DP03 117 aa16.24■□□□□ 0.19
CPNE1-223ENST00000475146 FER1L6-AS1Q8NA97 138 aa16.24■□□□□ 0.19
CPNE1-223ENST00000475146 TRBV10-1A0A0K0K1A3 114 aa16.23■□□□□ 0.19
CPNE1-223ENST00000475146 XKRY2A2RUG3 117 aa16.23■□□□□ 0.19
CPNE1-223ENST00000475146 RAB4BP61018 213 aa16.23■□□□□ 0.19
CPNE1-223ENST00000475146 RPL36AP83881 106 aaKnown RBP16.23■□□□□ 0.19
CPNE1-223ENST00000475146 RPL36ALQ969Q0 106 aaKnown RBP16.23■□□□□ 0.19
CPNE1-223ENST00000475146 PKHD1P08F94 4074 aa16.23■□□□□ 0.19
CPNE1-223ENST00000475146 PKD1P98161 4303 aa16.23■□□□□ 0.19
CPNE1-223ENST00000475146 A0A087WWC5 75 aa16.22■□□□□ 0.19
CPNE1-223ENST00000475146 IGLC6P0CF74 106 aa16.22■□□□□ 0.19
CPNE1-223ENST00000475146 ERVFC1-1P60608 527 aa16.22■□□□□ 0.19
CPNE1-223ENST00000475146 LYPD6BQ8NI32 183 aa16.22■□□□□ 0.19
CPNE1-223ENST00000475146 AP1S3Q96PC3 154 aa16.22■□□□□ 0.19
CPNE1-223ENST00000475146 DNAH11Q96DT5 4516 aa16.22■□□□□ 0.19
CPNE1-223ENST00000475146 F5H697 171 aa16.21■□□□□ 0.19
CPNE1-223ENST00000475146 SMIM17P0DL12 118 aa16.21■□□□□ 0.19
CPNE1-223ENST00000475146 TMEM250H0YL14 139 aa16.2■□□□□ 0.18
CPNE1-223ENST00000475146 EREGO14944 169 aa16.2■□□□□ 0.18
CPNE1-223ENST00000475146 CEBPGP53567 150 aa16.2■□□□□ 0.18
CPNE1-223ENST00000475146 TOR2AQ5JU69 321 aa16.2■□□□□ 0.18
CPNE1-223ENST00000475146 DYNC1H1Q14204 4646 aaKnown RBP16.2■□□□□ 0.18
CPNE1-223ENST00000475146 TRBV7-3A0A075B6L6 115 aa16.19■□□□□ 0.18
CPNE1-223ENST00000475146 NUDT10Q8NFP7 164 aa16.19■□□□□ 0.18
CPNE1-223ENST00000475146 NUDT11Q96G61 164 aa16.19■□□□□ 0.18
CPNE1-223ENST00000475146 IBA57-AS1B1ANH7 110 aa16.18■□□□□ 0.18
CPNE1-223ENST00000475146 KRTAP10-2P60368 255 aa16.18■□□□□ 0.18
CPNE1-223ENST00000475146 CACNG7P62955 275 aa16.18■□□□□ 0.18
CPNE1-223ENST00000475146 OCC1Q8TAD7 63 aa16.18■□□□□ 0.18
CPNE1-223ENST00000475146 EIF5A2Q9GZV4 153 aaKnown RBP16.18■□□□□ 0.18
CPNE1-223ENST00000475146 Q9HAA7 133 aa16.18■□□□□ 0.18
CPNE1-223ENST00000475146 K7EN84 100 aa16.17■□□□□ 0.18
CPNE1-223ENST00000475146 UBE2D3P61077 147 aa16.17■□□□□ 0.18
CPNE1-223ENST00000475146 UBE2D2P62837 147 aa16.17■□□□□ 0.18
CPNE1-223ENST00000475146 Q8N3U1 123 aa16.17■□□□□ 0.18
CPNE1-223ENST00000475146 F2Z2F3 143 aa16.16■□□□□ 0.18
CPNE1-223ENST00000475146 MGPP08493 103 aa16.16■□□□□ 0.18
CPNE1-223ENST00000475146 NEXN-AS1Q8NBZ9 246 aa16.16■□□□□ 0.18
CPNE1-223ENST00000475146 OR10G8Q8NGN5 311 aa16.16■□□□□ 0.18
CPNE1-223ENST00000475146 RNASE7Q9H1E1 156 aaKnown RBP16.16■□□□□ 0.18
CPNE1-223ENST00000475146 RPP21Q9H633 154 aaKnown RBP16.16■□□□□ 0.18
CPNE1-223ENST00000475146 KIAA1109Q2LD37 5005 aa16.16■□□□□ 0.18
CPNE1-223ENST00000475146 PSCAO43653 123 aa16.15■□□□□ 0.18
CPNE1-223ENST00000475146 LYZL1Q6UWQ5 148 aa16.15■□□□□ 0.18
CPNE1-223ENST00000475146 KIF25-AS1Q9Y6Z4 181 aa16.15■□□□□ 0.18
CPNE1-223ENST00000475146 HERC2O95714 4834 aa16.14■□□□□ 0.17
CPNE1-223ENST00000475146 A0A087WTM6 91 aa16.14■□□□□ 0.17
CPNE1-223ENST00000475146 URGCP-MRPS24S4R325 110 aa16.14■□□□□ 0.17
CPNE1-223ENST00000475146 FAM210AQ96ND0 272 aa16.13■□□□□ 0.17
CPNE1-223ENST00000475146 TRGC1P0CF51 173 aa16.12■□□□□ 0.17
CPNE1-223ENST00000475146 CTRLP40313 264 aa16.12■□□□□ 0.17
CPNE1-223ENST00000475146 LAGE3Q14657 143 aa16.12■□□□□ 0.17
CPNE1-223ENST00000475146 DAZ4Q86SG3 579 aaKnown RBP16.12■□□□□ 0.17
CPNE1-223ENST00000475146 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-223ENST00000475146 DAZ3Q9NR90 486 aaKnown RBP16.12■□□□□ 0.17
CPNE1-223ENST00000475146 NIT1Q86X76 327 aa16.11■□□□□ 0.17
CPNE1-223ENST00000475146 SMIM7Q9BQ49 75 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms