RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RAI1Q7Z5J4 1906 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 IGHV1-45A0A0A0MS14 117 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 CCKP06307 115 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 CXCL8P10145 99 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 RPL30P62888 115 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 BLCAPP62952 87 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 CYCSP99999 105 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 ITLN1Q8WWA0 313 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 SLC25A2Q9BXI2 301 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 CLEC7AQ9BXN2 247 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 TAS2R4Q9NYW5 299 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 NOTCH3Q9UM47 2321 aa4.44□□□□□ -1.7
SMARCE1-208ENST00000474246 IGLV5-45A0A087WSX0 123 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 IGKV6D-41A0A0C4DH26 115 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 LCE6AA0A183 80 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 A0A1B0GW54 56 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 C3orf84H3BNL1 204 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 K7EQD1 137 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 IGLV2-8P01709 118 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 ZNF645Q8N7E2 425 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 GABARAPL1Q9H0R8 117 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 IGHV4-39P01824 125 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 APCSP02743 223 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 IGHV4-38-2P0DP08 117 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 CCL4P13236 92 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 FGF12P61328 243 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 NRACQ8N912 160 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 CLDND2Q8NHS1 167 aa4.43□□□□□ -1.7
SMARCE1-208ENST00000474246 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 TRGV8A0A0C4DH27 118 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 IBA57-AS1B1ANH7 110 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 PIPP12273 146 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 MDKP21741 143 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 ZNF791Q3KP31 576 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 TMEM170BQ5T4T1 132 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 ZFP2Q6ZN57 461 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 FAM72BQ86X60 149 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 FLVCR1-AS1Q8TAF5 88 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 SMIM4Q8WVI0 70 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 OSTCQ9NRP0 149 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 IGKV1-16P04430 117 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 ICAM4Q14773 271 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 ADAMTSL4-AS1Q5T5F5 129 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 TMEM61Q8N0U2 210 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 TMEM252Q8N6L7 170 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 TAC3Q9UHF0 121 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 ARL2-SNX15V9GYD0 113 aa4.42□□□□□ -1.7
SMARCE1-208ENST00000474246 HEATR5AQ86XA9 2040 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 TENM2Q9NT68 2774 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 OBSL1O75147 1896 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 A0A1W2PQD3 144 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 E7EQL1 145 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 NTN3O00634 580 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 NDUFC1O43677 76 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 PRSS1P07477 247 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 CKS2P33552 79 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 EFNA4P52798 201 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 FAM104BQ5XKR9 115 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 CCL28Q9NRJ3 127 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 AKAP6Q13023 2319 aa4.41□□□□□ -1.7
SMARCE1-208ENST00000474246 LY6G6EA0A0G2JKS1 128 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 K7EQG2 157 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 CD28P10747 220 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 DSCR4P56555 118 aaPredicted RBP4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 NOXRED1Q6NXP6 359 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 IGFL3Q6UXB1 125 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 PPP1R1CQ8WVI7 109 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 FAM103A1Q9BTL3 118 aaKnown RBP4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 HILPDAQ9Y5L2 63 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 U3KQA8 63 aa4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.7
SMARCE1-208ENST00000474246 COL27A1Q8IZC6 1860 aaPredicted RBP4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 IGHV1-24A0A0C4DH33 117 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 IGHV3-38A0A0C4DH36 116 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 IGKV1-12A0A0C4DH73 117 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 A0A1W2PS18 150 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 PEX7O00628 323 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 TSHBP01222 138 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 IGKV1D-12P01611 117 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 PRSS2P07478 247 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 RNASE2P10153 161 aaKnown RBP4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 GNB1P62873 340 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 BSPH1Q075Z2 132 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 C17orf58Q2M2W7 97 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 C6orf201Q7Z4U5 140 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 DAND5Q8N907 189 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 RMI2Q96E14 147 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.71
SMARCE1-208ENST00000474246 IGKV6D-21A0A0A0MT36 114 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 A6NN06 94 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 FXYD1O00168 92 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 SNRNP200O75643 2136 aaKnown RBP4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 SLC25A16P16260 332 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 KRTAP1-1Q07627 177 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 C9orf57Q5W0N0 161 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms