RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 APCP25054 2843 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
SCAMP4-207ENST00000472442 DEFB112Q30KQ8 113 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 RBAKDNA6NC62 111 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 FAM223BA6NKX1 122 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 UBE2D1P51668 147 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 DEFB113Q30KQ7 82 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 CHD6Q8TD26 2715 aa10□□□□□ -0.81
SCAMP4-207ENST00000472442 NAV2Q8IVL1 2488 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 SPRY2O43597 315 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 IGHV4-59P01825 116 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 TOMM6Q96B49 74 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 CARD19Q96LW7 228 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 CR1P17927 2039 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 PRSS29PA6NIE9 313 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 IGHV4-31P0DP07 118 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 RASL10AQ92737 203 aa9.99□□□□□ -0.81
SCAMP4-207ENST00000472442 IGHV3-49A0A0A0MS15 119 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 J3QLI3 93 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 UBE2D3P61077 147 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 UBE2D2P62837 147 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 KLHL30-AS1Q8NEE0 82 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 RPL39LQ96EH5 51 aaKnown RBP9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 SLC50A1Q9BRV3 221 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 SUMO2P61956 95 aaKnown RBP9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 RNF183Q96D59 192 aa9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 BEX4Q9NWD9 120 aaPredicted RBP9.98□□□□□ -0.81
SCAMP4-207ENST00000472442 MXRA5Q9NR99 2828 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 IGHV4-4A0A075B6R2 117 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 BRI3O95415 125 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 TEN1Q86WV5 123 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 TRAV8-2A0A0B4J237 113 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 J3KRW8 73 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 M0R381 172 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 CD7P09564 240 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 KRTAP1-3Q8IUG1 177 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 U3KQE9 123 aa9.97□□□□□ -0.81
SCAMP4-207ENST00000472442 TCL1BO95988 128 aa9.96□□□□□ -0.81
SCAMP4-207ENST00000472442 CFHR3Q02985 330 aa9.96□□□□□ -0.81
SCAMP4-207ENST00000472442 TMEM95Q3KNT9 176 aa9.96□□□□□ -0.81
SCAMP4-207ENST00000472442 FSHBP01225 129 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 IGLV1-40P01703 118 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 PRR9Q5T870 116 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 LRRC75A-AS1Q8N1F1 130 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 H3BUA1 57 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 IGHV3-11P01762 117 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 ARL3P36405 182 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 UNQ9165/PRO28630Q6UXU0 137 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
SCAMP4-207ENST00000472442 TEX15Q9BXT5 2789 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 KMT2BQ9UMN6 2715 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 EMP1P54849 157 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 METTL26Q96S19 204 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 PF4V1P10720 104 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 LYRM7Q5U5X0 104 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 HIST2H2BCQ6DN03 193 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 Q96MF0 132 aa9.95□□□□□ -0.82
SCAMP4-207ENST00000472442 C14orf178Q8N769 122 aaPredicted RBP9.94□□□□□ -0.82
SCAMP4-207ENST00000472442 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
SCAMP4-207ENST00000472442 A8MWV9 139 aa9.94□□□□□ -0.82
SCAMP4-207ENST00000472442 MGPP08493 103 aa9.94□□□□□ -0.82
SCAMP4-207ENST00000472442 ANKRD29Q8N6D5 301 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 ZNF688P0C7X2 276 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 ANAPC13Q9BS18 74 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 DOPEY2Q9Y3R5 2298 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 A0A0J9YY99 117 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 C11orf86A6NJI1 115 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 DUSP14O95147 198 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
SCAMP4-207ENST00000472442 C10orf99Q6UWK7 81 aa9.92□□□□□ -0.82
SCAMP4-207ENST00000472442 PRRC2AP48634 2157 aaKnown RBP9.92□□□□□ -0.82
SCAMP4-207ENST00000472442 CRYGDP07320 174 aa9.92□□□□□ -0.82
SCAMP4-207ENST00000472442 C9orf139Q6ZV77 190 aa9.92□□□□□ -0.82
SCAMP4-207ENST00000472442 DPH3P1Q9H4G8 78 aa9.92□□□□□ -0.82
SCAMP4-207ENST00000472442 SS18L2Q9UHA2 77 aa9.92□□□□□ -0.82
SCAMP4-207ENST00000472442 NDUFA4O00483 81 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 CFC1BP0CG36 223 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 CFC1P0CG37 223 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 S100A4P26447 101 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 Q6YL49 198 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 CREBBPQ92793 2442 aa9.91□□□□□ -0.82
SCAMP4-207ENST00000472442 PSMB8P28062 276 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 MRPL53Q96EL3 112 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-207ENST00000472442 VCX2Q9H322 139 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms