RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 AZU1P20160 251 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 FOXA3P55318 350 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-211ENST00000471260 GNG5P63218 68 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 BLNKQ8WV28 456 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
HMGN1-211ENST00000471260 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
HMGN1-211ENST00000471260 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-211ENST00000471260 TIMM8BQ9Y5J9 83 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-211ENST00000471260 TRBV19A0A075B6N1 114 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 CBY3A6NI87 242 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 HSBP1O75506 76 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 PRM2P04554 102 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
HMGN1-211ENST00000471260 PRR27Q6MZM9 219 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 TMEM263Q8WUH6 116 aaKnown RBP9.53□□□□□ -0.88
HMGN1-211ENST00000471260 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
HMGN1-211ENST00000471260 A0A1B0GV90 55 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 F2Z2F3 143 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 ATP5G1P05496 136 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 CTRLP40313 264 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 KRTDAPP60985 99 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 NIT1Q86X76 327 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 Q8N976 141 aa9.52□□□□□ -0.89
HMGN1-211ENST00000471260 RNASE8Q8TDE3 154 aaKnown RBP9.52□□□□□ -0.89
HMGN1-211ENST00000471260 H3BTX0 84 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 EREGO14944 169 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 SPINK4O60575 86 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 HTN1P15515 57 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 LEPP41159 167 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 SNHG12Q9BXW3 62 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 AAMDCQ9H7C9 122 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
HMGN1-211ENST00000471260 F5H768 121 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 IGLV2-11P01706 119 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 C3orf79P0CE67 100 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 RIGQ13278 110 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 KIAA1644Q3SXP7 199 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 LINC00477Q96M19 166 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
HMGN1-211ENST00000471260 CT45A10P0DMU9 189 aa9.49□□□□□ -0.89
HMGN1-211ENST00000471260 BTF3P20290 206 aaKnown RBP9.49□□□□□ -0.89
HMGN1-211ENST00000471260 Q6ZR54 194 aa9.49□□□□□ -0.89
HMGN1-211ENST00000471260 GOLT1AQ6ZVE7 132 aa9.49□□□□□ -0.89
HMGN1-211ENST00000471260 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
HMGN1-211ENST00000471260 RPH3ALQ9UNE2 315 aa9.49□□□□□ -0.89
HMGN1-211ENST00000471260 PAM16Q9Y3D7 125 aa9.49□□□□□ -0.89
HMGN1-211ENST00000471260 PRB4P10163 310 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-211ENST00000471260 CSN1S1P47710 185 aa9.48□□□□□ -0.89
HMGN1-211ENST00000471260 RPS20P60866 119 aaKnown RBP9.48□□□□□ -0.89
HMGN1-211ENST00000471260 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
HMGN1-211ENST00000471260 SPATA45Q537H7 98 aa9.48□□□□□ -0.89
HMGN1-211ENST00000471260 LINC00612Q8N6U2 182 aa9.48□□□□□ -0.89
HMGN1-211ENST00000471260 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
HMGN1-211ENST00000471260 A0A1B0GUT8 65 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 M0R2N4 97 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 M0R3E3 92 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 RNASEKQ6P5S7 137 aaKnown RBP9.47□□□□□ -0.89
HMGN1-211ENST00000471260 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 OR2D3Q8NGH3 330 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 FAM19A4Q96LR4 140 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 PSG8Q9UQ74 426 aa9.47□□□□□ -0.89
HMGN1-211ENST00000471260 TRAV12-3A0A0B4J271 114 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 KLLNB2CW77 178 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 RTL8CO15255 209 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 IGLC3P0DOY3 106 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 NTF3P20783 257 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 CAMPP49913 170 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 CCL18P55774 89 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 GAGE1Q13065 139 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 DAZ2Q13117 558 aaKnown RBP9.46□□□□□ -0.9
HMGN1-211ENST00000471260 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 PRNTQ86SH4 94 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 LINC00467Q9BRT7 94 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
HMGN1-211ENST00000471260 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 C7orf71A4D174 169 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 J3KRW8 73 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 TCAPO15273 167 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 NUDT3O95989 172 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 PGLYRP4Q96LB8 373 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 AGPAT4-IT1Q9H0P7 198 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
HMGN1-211ENST00000471260 MRPS16Q9Y3D3 137 aaKnown RBP9.45□□□□□ -0.9
HMGN1-211ENST00000471260 TRBV7-9A0A0J9YWB2 115 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 H3BNG1 76 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 HNRNPA3P51991 378 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms