RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TRGV11A0A075B6L2 103 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 IGHV1OR15-1A0A075B7D0 117 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 TRAV34A0A0B4J273 112 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 A0A0D9SG52 128 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 RBAKDNA6NC62 111 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 PGPA6NDG6 321 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 IFITM10A6NMD0 228 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 KLLNB2CW77 178 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 DIRC3C9JPN6 131 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 F8WDY8 70 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 CRISP2P16562 243 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 GCHFRP30047 84 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 CCL18P55774 89 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 GNG5P63218 68 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 SERF2P84101 59 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 IQCJQ1A5X6 159 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 RNF151Q2KHN1 245 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 MUC21Q5SSG8 566 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 FAM159AQ6UWV7 190 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 Q6ZRN7 208 aaPredicted RBP4.03□□□□□ -1.76
VARS-222ENST00000470953 LINC00528Q8N1L1 170 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 C5orf17Q8NAS9 161 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 PRO1933Q9H354 126 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 TMEM167BQ9NRX6 74 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.76
VARS-222ENST00000470953 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 A0A0J9YY99 117 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 CTXND1A0A1B0GTU2 59 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 KANTRA0A1W2PQU2 76 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 PLAC8L1A1L4L8 177 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TAAR5O14804 337 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 PHOX2AO14813 284 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TSPAN13O95857 204 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 IGHV3-53P01767 116 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 ADCYAP1P18509 176 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 CRYBA4P53673 196 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TCL1AP56279 114 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 ZNF345Q14585 488 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TMEM183BQ1AE95 376 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 ANXA2RQ3ZCQ2 193 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 C5orf47Q569G3 176 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 IBA57Q5T440 356 aaKnown RBP4.02□□□□□ -1.77
VARS-222ENST00000470953 PRR9Q5T870 116 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 RPL7L1Q6DKI1 246 aaKnown RBP4.02□□□□□ -1.77
VARS-222ENST00000470953 ALKAL2Q6UX46 152 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 Q6ZTI0 123 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TMEM183AQ8IXX5 376 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 ZFAND2AQ8N6M9 145 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 PCNPQ8WW12 178 aaKnown RBP4.02□□□□□ -1.77
VARS-222ENST00000470953 SDF2L1Q9HCN8 221 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
VARS-222ENST00000470953 FAM30AQ9NZY2 134 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TNFSF18Q9UNG2 199 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
VARS-222ENST00000470953 TRAV8-1A0A0A6YYK1 113 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 TRAV21A0A0B4J279 112 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 TRGV4A0A0C4DH28 118 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 A0A1B0GW15 77 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 MAP1LC3B2A6NCE7 125 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 RNF222A6NCQ9 220 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 M0R036 132 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 CCL25O15444 150 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 DNAH10OSP0CZ25 163 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 GZMBP10144 247 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
VARS-222ENST00000470953 DAZ2Q13117 558 aaKnown RBP4.01□□□□□ -1.77
VARS-222ENST00000470953 VAMP3Q15836 100 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 COA6Q5JTJ3 125 aaKnown RBP4.01□□□□□ -1.77
VARS-222ENST00000470953 PRNTQ86SH4 94 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 CYB561D1Q8N8Q1 229 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 OR4C5Q8NGB2 326 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 TMED6Q8WW62 240 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 FAM19A4Q96LR4 140 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 SGK494Q96LW2 274 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 ZNF471Q9BX82 626 aaPredicted RBP4.01□□□□□ -1.77
VARS-222ENST00000470953 MAP1LC3BQ9GZQ8 125 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 CST9LQ9H4G1 147 aa4.01□□□□□ -1.77
VARS-222ENST00000470953 FBLL1A6NHQ2 334 aaKnown RBP4□□□□□ -1.77
VARS-222ENST00000470953 PAX4O43316 350 aa4□□□□□ -1.77
VARS-222ENST00000470953 ZNF324O75467 553 aaPredicted RBP4□□□□□ -1.77
VARS-222ENST00000470953 TCRAP04437 139 aa4□□□□□ -1.77
VARS-222ENST00000470953 SMIM17P0DL12 118 aa4□□□□□ -1.77
VARS-222ENST00000470953 UBE2G1P62253 170 aa4□□□□□ -1.77
VARS-222ENST00000470953 SUMO1P63165 101 aaKnown RBP4□□□□□ -1.77
VARS-222ENST00000470953 TTC32Q5I0X7 151 aa4□□□□□ -1.77
VARS-222ENST00000470953 CST9LP1Q5W188 147 aa4□□□□□ -1.77
VARS-222ENST00000470953 Q6AWC8 147 aa4□□□□□ -1.77
VARS-222ENST00000470953 PRR27Q6MZM9 219 aa4□□□□□ -1.77
VARS-222ENST00000470953 CDPF1Q6NVV7 123 aa4□□□□□ -1.77
VARS-222ENST00000470953 C11orf72Q8NBR9 251 aa4□□□□□ -1.77
VARS-222ENST00000470953 FAM213BQ8TBF2 198 aa4□□□□□ -1.77
VARS-222ENST00000470953 KCNS1Q96KK3 526 aa4□□□□□ -1.77
VARS-222ENST00000470953 MIEN1Q9BRT3 115 aa4□□□□□ -1.77
VARS-222ENST00000470953 LINC00467Q9BRT7 94 aa4□□□□□ -1.77
VARS-222ENST00000470953 Q9H8V8 135 aa4□□□□□ -1.77
VARS-222ENST00000470953 VAX2Q9UIW0 290 aa4□□□□□ -1.77
VARS-222ENST00000470953 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
VARS-222ENST00000470953 KLF12Q9Y4X4 402 aa4□□□□□ -1.77
VARS-222ENST00000470953 ICOSQ9Y6W8 199 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms