RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
NPHP4-207ENST00000470763 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
NPHP4-207ENST00000470763 Q8NA96 180 aa10.43□□□□□ -0.74
NPHP4-207ENST00000470763 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
NPHP4-207ENST00000470763 A4D1N5 150 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 GAGE12JA6NER3 117 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 EIF4EBP3O60516 100 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-207ENST00000470763 GAGE7O76087 117 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 ELANEP08246 267 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 GAGE12FP0CL80 117 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 GAGE12GP0CL81 117 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 GAGE12IP0CL82 117 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 GAGE4Q13068 117 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 PHLDA3Q9Y5J5 127 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 CLPSL1A2RUU4 121 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 BEX4Q9NWD9 120 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-207ENST00000470763 SPTAN1Q13813 2472 aaKnown RBP10.42□□□□□ -0.74
NPHP4-207ENST00000470763 Q8N1Y9 231 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 FAM57AQ8TBR7 257 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 TIMD4Q96H15 378 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 DOPEY2Q9Y3R5 2298 aa10.42□□□□□ -0.74
NPHP4-207ENST00000470763 TEX49A0A1B0GTD5 131 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 IGHV4-39P01824 125 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 ZFHX3Q15911 3703 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 IFITM1P13164 125 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 Q1RN00 199 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 PRR30Q53SZ7 412 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-207ENST00000470763 MUC4Q99102 2169 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 MAST4O15021 2626 aa10.41□□□□□ -0.74
NPHP4-207ENST00000470763 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 IGHV7-81A0A0B4J1V7 117 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 C16orf92Q96LL3 132 aa10.4□□□□□ -0.74
NPHP4-207ENST00000470763 RPL32P62910 135 aaKnown RBP10.4□□□□□ -0.75
NPHP4-207ENST00000470763 IGFL3Q6UXB1 125 aa10.4□□□□□ -0.75
NPHP4-207ENST00000470763 J3QQQ9 107 aa10.39□□□□□ -0.75
NPHP4-207ENST00000470763 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
NPHP4-207ENST00000470763 ASIPP42127 132 aa10.39□□□□□ -0.75
NPHP4-207ENST00000470763 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
NPHP4-207ENST00000470763 PMVKQ15126 192 aa10.39□□□□□ -0.75
NPHP4-207ENST00000470763 CENPEQ02224 2701 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 GNRH2O43555 120 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
NPHP4-207ENST00000470763 GPHB5Q86YW7 130 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 AMELXQ99217 191 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 HIVEP3Q5T1R4 2406 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 C15orf53Q8NAA6 179 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 ODF3Q96PU9 254 aa10.38□□□□□ -0.75
NPHP4-207ENST00000470763 ANKHD1Q8IWZ3 2542 aaKnown RBP10.37□□□□□ -0.75
NPHP4-207ENST00000470763 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
NPHP4-207ENST00000470763 JPT2Q9H910 190 aa10.37□□□□□ -0.75
NPHP4-207ENST00000470763 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
NPHP4-207ENST00000470763 C3orf56Q8N813 242 aa10.37□□□□□ -0.75
NPHP4-207ENST00000470763 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
NPHP4-207ENST00000470763 METTL26Q96S19 204 aa10.37□□□□□ -0.75
NPHP4-207ENST00000470763 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-207ENST00000470763 G3V318 75 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 LINC01620Q4KN68 170 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 MUSTN1Q8IVN3 82 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 RNASE4P34096 147 aaKnown RBP10.36□□□□□ -0.75
NPHP4-207ENST00000470763 ZFAND2AQ8N6M9 145 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 CENPVL3A0A0U1RRI6 287 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 GNLYP22749 145 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 NAV2Q8IVL1 2488 aa10.36□□□□□ -0.75
NPHP4-207ENST00000470763 ATP6V0E1O15342 81 aa10.35□□□□□ -0.75
NPHP4-207ENST00000470763 LY6G5BQ8NDX9 201 aa10.35□□□□□ -0.75
NPHP4-207ENST00000470763 ODF3BA8MYP8 253 aa10.35□□□□□ -0.75
NPHP4-207ENST00000470763 B9A039 149 aa10.35□□□□□ -0.75
NPHP4-207ENST00000470763 F6UB75 175 aa10.35□□□□□ -0.75
NPHP4-207ENST00000470763 VMO1Q7Z5L0 202 aa10.35□□□□□ -0.75
NPHP4-207ENST00000470763 A0A087WWL8 130 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-207ENST00000470763 CYSRT1A8MQ03 144 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 BRI3O95415 125 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 ZNF580Q9UK33 172 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 IGKV3-7A0A075B6H7 116 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 F5H697 171 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 Q8N9W7 124 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 DOPEY1Q5JWR5 2465 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
NPHP4-207ENST00000470763 Q8N6K4 173 aa10.34□□□□□ -0.75
NPHP4-207ENST00000470763 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
NPHP4-207ENST00000470763 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
NPHP4-207ENST00000470763 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-207ENST00000470763 ADARB2-AS1A8MUL3 147 aa10.33□□□□□ -0.76
NPHP4-207ENST00000470763 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-207ENST00000470763 H3BMM0 161 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms