RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-208	ENST00000470019	GAS8-AS1	O95177	125 aa		11.19	□□□□□ -0.62
PTK7-208	ENST00000470019	ESD	P10768	282 aa		11.19	□□□□□ -0.62
PTK7-208	ENST00000470019	FABP2	P12104	132 aa		11.19	□□□□□ -0.62
PTK7-208	ENST00000470019		Q6YL49	198 aa		11.19	□□□□□ -0.62
PTK7-208	ENST00000470019	DEFB130B	P0DP73	79 aa		11.19	□□□□□ -0.62
PTK7-208	ENST00000470019	DEFB130A	P0DP74	79 aa		11.19	□□□□□ -0.62
PTK7-208	ENST00000470019	SMIM13	P0DJ93	91 aa		11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	COTL1	Q14019	142 aa		11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	RNASE13	Q5GAN3	156 aa	Known RBP	11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	PAPPA-AS1	Q5QFB9	102 aa		11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	PRR9	Q5T870	116 aa		11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	CITED2	Q99967	270 aa	Predicted RBP	11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	DNAJC9-AS1	A6NH13	148 aa		11.18	□□□□□ -0.62
PTK7-208	ENST00000470019		K7EMT4	169 aa		11.18	□□□□□ -0.62
PTK7-208	ENST00000470019	ANKRD39	Q53RE8	183 aa		11.17	□□□□□ -0.62
PTK7-208	ENST00000470019	PCP2	Q8IVA1	136 aa		11.17	□□□□□ -0.62
PTK7-208	ENST00000470019	ORAOV1	Q8WV07	137 aa		11.17	□□□□□ -0.62
PTK7-208	ENST00000470019	FOXI2	Q6ZQN5	318 aa		11.17	□□□□□ -0.62
PTK7-208	ENST00000470019	IGLC6	P0CF74	106 aa		11.16	□□□□□ -0.62
PTK7-208	ENST00000470019	TOMM7	Q9P0U1	55 aa		11.16	□□□□□ -0.62
PTK7-208	ENST00000470019	C19orf54	Q5BKX5	351 aa		11.16	□□□□□ -0.62
PTK7-208	ENST00000470019	PSMB8	P28062	276 aa		11.16	□□□□□ -0.62
PTK7-208	ENST00000470019	PRM2	P04554	102 aa		11.15	□□□□□ -0.62
PTK7-208	ENST00000470019	CHD6	Q8TD26	2715 aa		11.15	□□□□□ -0.62
PTK7-208	ENST00000470019	ZFAND2A	Q8N6M9	145 aa		11.15	□□□□□ -0.62
PTK7-208	ENST00000470019	LGALS9B	Q3B8N2	356 aa		11.15	□□□□□ -0.62
PTK7-208	ENST00000470019	LGALS9C	Q6DKI2	356 aa		11.15	□□□□□ -0.62
PTK7-208	ENST00000470019		A0A0J9YX75	114 aa		11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	MRPS16	Q9Y3D3	137 aa	Known RBP	11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE12B	A1L429	117 aa		11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE7	O76087	117 aa		11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE12F	P0CL80	117 aa		11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE12G	P0CL81	117 aa		11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE12I	P0CL82	117 aa		11.14	□□□□□ -0.63
PTK7-208	ENST00000470019	SPX	Q9BT56	116 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	TMEM238L	A0A1B0GVL6	79 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019		A6NJY4	79 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	PLN	P26678	52 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	SUMO4	Q6EEV6	95 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	TRPT1	Q86TN4	253 aa	Known RBP	11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	CD5L	O43866	347 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	HSD52	Q0P140	79 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	ZNF493	Q6ZR52	646 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE12J	A6NER3	117 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	DLEU1	O43261	78 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	NPC2	P61916	151 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	RPL39	P62891	51 aa	Known RBP	11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE1	Q13065	139 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE4	Q13068	117 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE5	Q13069	117 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	GAGE13	Q4V321	117 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	MEIG1	Q5JSS6	88 aa		11.13	□□□□□ -0.63
PTK7-208	ENST00000470019	ASH1L	Q9NR48	2969 aa	Known RBP	11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	COX8A	P10176	69 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019		Q6ZSV7	163 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	SMR3A	Q99954	134 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	ZNF702P	Q9H963	129 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	SPCS1	Q9Y6A9	102 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	F8	P00451	2351 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	TRAV2	A0A0B4J234	112 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	IGLV1-40	P01703	118 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	TRAV13-1	A0A0B4J241	112 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019		K7EMI3	77 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	ZNRF2	Q8NHG8	242 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	CHCHD5	Q9BSY4	110 aa		11.12	□□□□□ -0.63
PTK7-208	ENST00000470019	AZU1	P20160	251 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	LINC01545	Q5VT33	79 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	GATD1	Q8NB37	220 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	CHAC1	Q9BUX1	264 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	PRSS29P	A6NIE9	313 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	RPL36A	P83881	106 aa	Known RBP	11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	ADAMTSL5	Q6ZMM2	481 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019	RPL36AL	Q969Q0	106 aa	Known RBP	11.11	□□□□□ -0.63
PTK7-208	ENST00000470019		U3KQE9	123 aa		11.11	□□□□□ -0.63
PTK7-208	ENST00000470019		K7EQG2	157 aa		11.1	□□□□□ -0.63
PTK7-208	ENST00000470019	NPS	P0C0P6	89 aa		11.1	□□□□□ -0.63
PTK7-208	ENST00000470019		F8VRH5	84 aa		11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	C20orf78	Q9BR46	151 aa		11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	NOP10	Q9NPE3	64 aa	Known RBP	11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	ATR	Q13535	2644 aa		11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	URB1-AS1	Q96HZ7	61 aa		11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	TMEM101	Q96IK0	257 aa		11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	SPAG8	Q99932	426 aa	Predicted RBP	11.09	□□□□□ -0.63
PTK7-208	ENST00000470019	SEC11A	P67812	179 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	RNF185	Q96GF1	192 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	ZNF625	Q96I27	306 aa	Predicted RBP	11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	PRADC1	Q9BSG0	188 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019		I3L3M4	83 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019		P0DMU3	169 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	FAM231A	P0DMU4	169 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	FAM231C	P0DMU5	169 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	SPATA12	Q7Z6I5	190 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019	LRRC75A-AS1	Q8N1F1	130 aa		11.08	□□□□□ -0.64
PTK7-208	ENST00000470019		A8MWV9	139 aa		11.07	□□□□□ -0.64
PTK7-208	ENST00000470019	C21orf62-AS1	Q17RA5	79 aa		11.07	□□□□□ -0.64
PTK7-208	ENST00000470019		J3QR89	54 aa		11.07	□□□□□ -0.64
PTK7-208	ENST00000470019	CRX	O43186	299 aa	Predicted RBP	11.07	□□□□□ -0.64
PTK7-208	ENST00000470019	COX11	Q9Y6N1	276 aa		11.07	□□□□□ -0.64
PTK7-208	ENST00000470019		M0R2P5	195 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms