RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 LELP1Q5T871 98 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 C14orf178Q8N769 122 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-207ENST00000468267 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 GNG13Q9P2W3 67 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
SSBP1-207ENST00000468267 RPL35P42766 123 aaKnown RBP11.54□□□□□ -0.56
SSBP1-207ENST00000468267 ZFP82Q8N141 532 aa11.54□□□□□ -0.56
SSBP1-207ENST00000468267 Q9UF83 564 aa11.54□□□□□ -0.56
SSBP1-207ENST00000468267 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 M0R381 172 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 CDK2AP2O75956 126 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 CXCL1P09341 107 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 ERVFC1-1P60608 527 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 GAGE1Q13065 139 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 GAGE4Q13068 117 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 GAGE5Q13069 117 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 SLC51BQ86UW2 128 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 KRTAP17-1Q9BYP8 105 aa11.53□□□□□ -0.56
SSBP1-207ENST00000468267 A0A087WWL8 130 aa11.52□□□□□ -0.57
SSBP1-207ENST00000468267 EREGO14944 169 aa11.52□□□□□ -0.57
SSBP1-207ENST00000468267 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.57
SSBP1-207ENST00000468267 FAM74A4Q5TZK3 123 aa11.52□□□□□ -0.57
SSBP1-207ENST00000468267 IBA57-AS1B1ANH7 110 aa11.51□□□□□ -0.57
SSBP1-207ENST00000468267 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
SSBP1-207ENST00000468267 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
SSBP1-207ENST00000468267 A0A087WTM6 91 aa11.5□□□□□ -0.57
SSBP1-207ENST00000468267 PRR27Q6MZM9 219 aa11.5□□□□□ -0.57
SSBP1-207ENST00000468267 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
SSBP1-207ENST00000468267 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
SSBP1-207ENST00000468267 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
SSBP1-207ENST00000468267 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
SSBP1-207ENST00000468267 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
SSBP1-207ENST00000468267 AKAP14Q86UN6 197 aa11.49□□□□□ -0.57
SSBP1-207ENST00000468267 OR10AG1Q8NH19 301 aa11.49□□□□□ -0.57
SSBP1-207ENST00000468267 A0A087WWC5 75 aa11.48□□□□□ -0.57
SSBP1-207ENST00000468267 SNAI2O43623 268 aa11.48□□□□□ -0.57
SSBP1-207ENST00000468267 IGLV2-8P01709 118 aa11.48□□□□□ -0.57
SSBP1-207ENST00000468267 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-207ENST00000468267 CENPWQ5EE01 88 aa11.48□□□□□ -0.57
SSBP1-207ENST00000468267 ABCA13Q86UQ4 5058 aa11.48□□□□□ -0.57
SSBP1-207ENST00000468267 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
SSBP1-207ENST00000468267 PDE6DO43924 150 aa11.47□□□□□ -0.57
SSBP1-207ENST00000468267 IFNA1P01562 189 aa11.47□□□□□ -0.57
SSBP1-207ENST00000468267 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
SSBP1-207ENST00000468267 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
SSBP1-207ENST00000468267 C9orf62Q8N4C0 152 aa11.47□□□□□ -0.57
SSBP1-207ENST00000468267 hCG_2014768A0A024R1R8 64 aa11.46□□□□□ -0.57
SSBP1-207ENST00000468267 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
SSBP1-207ENST00000468267 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.575e-7■□□□□ 8.7
SSBP1-207ENST00000468267 MUC21A0A0G2JKD1 596 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 MUC21A0A140T8X8 626 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 PSCAO43653 123 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 BCL2P10415 239 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 GNG4P50150 75 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 RAB4BP61018 213 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 LAGE3Q14657 143 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 SPANXN1Q5VSR9 72 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 Q8N3U1 123 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 Q9HAA7 133 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 MED9Q9NWA0 146 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 VAX2Q9UIW0 290 aa11.45□□□□□ -0.58
SSBP1-207ENST00000468267 RPL36AP83881 106 aaKnown RBP11.44□□□□□ -0.58
SSBP1-207ENST00000468267 RPL36ALQ969Q0 106 aaKnown RBP11.44□□□□□ -0.58
SSBP1-207ENST00000468267 DAZAP1Q96EP5 407 aaKnown RBP11.44□□□□□ -0.58
SSBP1-207ENST00000468267 TRBV7-3A0A075B6L6 115 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 C19orf71A6NCJ1 209 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 LRCOL1A6NCL2 159 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 TAGLN2P37802 199 aaKnown RBP11.43□□□□□ -0.58
SSBP1-207ENST00000468267 UBE2D3P61077 147 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 UBE2D2P62837 147 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 OR10G8Q8NGN5 311 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 KRTAP4-5Q9BYR2 181 aa11.43□□□□□ -0.58
SSBP1-207ENST00000468267 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
SSBP1-207ENST00000468267 GZMBP10144 247 aa11.42□□□□□ -0.58
SSBP1-207ENST00000468267 LORP23490 312 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-207ENST00000468267 RPS20P60866 119 aaKnown RBP11.42□□□□□ -0.58
SSBP1-207ENST00000468267 SSTP61278 116 aa11.42□□□□□ -0.58
SSBP1-207ENST00000468267 ZNF56Q15929 161 aa11.42□□□□□ -0.58
SSBP1-207ENST00000468267 DAZ4Q86SG3 579 aaKnown RBP11.42□□□□□ -0.58
SSBP1-207ENST00000468267 MAPKAPK5-AS1Q8N8E1 139 aa11.42□□□□□ -0.58
SSBP1-207ENST00000468267 OR2D3Q8NGH3 330 aa11.42□□□□□ -0.58
SSBP1-207ENST00000468267 DAZ3Q9NR90 486 aaKnown RBP11.42□□□□□ -0.58
SSBP1-207ENST00000468267 IGLC6P0CF74 106 aa11.41□□□□□ -0.58
SSBP1-207ENST00000468267 NEXN-AS1Q8NBZ9 246 aa11.41□□□□□ -0.58
SSBP1-207ENST00000468267 TM2D2Q9BX73 214 aa11.41□□□□□ -0.58
SSBP1-207ENST00000468267 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
SSBP1-207ENST00000468267 KIF25-AS1Q9Y6Z4 181 aa11.41□□□□□ -0.58
SSBP1-207ENST00000468267 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
SSBP1-207ENST00000468267 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
SSBP1-207ENST00000468267 NIT1Q86X76 327 aa11.4□□□□□ -0.58
SSBP1-207ENST00000468267 FER1L6-AS1Q8NA97 138 aa11.4□□□□□ -0.58
SSBP1-207ENST00000468267 F5H697 171 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 P01737 135 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 SMIM17P0DL12 118 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 BLOC1S1P78537 153 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 TOR2AQ5JU69 321 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms